| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523389
Identifier: 42523389
GI number: 42523389
Start: 1826973
End: 1827638
Strand: Direct
Name: 42523389
Synonym: Bd1910
Alternate gene names: NA
Gene position: 1826973-1827638 (Clockwise)
Preceding gene: 42523388
Following gene: 42523390
Centisome position: 48.29
GC content: 50.6
Gene sequence:
>666_bases ATGGCGCACGGCTTTTTCTTTTCAACGACCCTCGGTGTTCTTCTTTTCAGTTTGCAACTTTTCGCCGCCACTCCCAAGGA AGCAGAGCTGGTTCTGGATCAGGCTCATCAAAAGATGATTCTGCTGGTAGAGGGCCTGTTTAATTCCGGGCAGATAACAG AGATCGACAAGCTGCTTCTGGTTTCGGATTTGAATGGCTATAAGACTGCTTACAAAACCTATTCCAGCGCAGCGGCGCAG GCTCACACCTATCTGAAAAACAAAAAACAGCGCGAGGACCATTACGCCAATAAGATTCTGTACATTGCCTCTAGGCTGGA GAATCTGGCTGCGAATCCCGCCGGAAATATCACAGACGTCACCGAAGAGGTGACTGACTTTGTGCCAGCGGACAGCAAGT GTGGCGTGCCGGTGGATCTTCCCTGCGTGGCCCACGAAGTGGAGCTGCGCATGGACACGATCTATTTGAATATCAACAAG CGGAATTCCAAGGTGCGGGCCAAATTTAAAAGTGTTGCAGATCGTGGATTGCATGCCGCTGAACTTTATGCGCGCATACT GGCTTCGCTGCGCACTGATGGCGGGGCTATGTATCCAACCGAGTATATCTACGGTAAAGACCGTCTGGTCATGAGCGTGA AGCAGGAAATTGAAGAGGGTTACTAG
Upstream 100 bases:
>100_bases AGATTCTGGGCCTGCAGGACTTTTAGTTGTTATTGTATTTTCCCCGACAGGCTACCGCCTGATTATAATGTCACTAAACT GAGGGCAAAAGAGGTGACCT
Downstream 100 bases:
>100_bases GTGAAAAGAACTCTGGGACTTGTGATGTTGGTTTTTTATGCCACGGGCATGATCCTTGGGGCGGGGGTGTATTCGGTGAT CGGTAAGGCTGCCGGGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAHGFFFSTTLGVLLFSLQLFAATPKEAELVLDQAHQKMILLVEGLFNSGQITEIDKLLLVSDLNGYKTAYKTYSSAAAQ AHTYLKNKKQREDHYANKILYIASRLENLAANPAGNITDVTEEVTDFVPADSKCGVPVDLPCVAHEVELRMDTIYLNINK RNSKVRAKFKSVADRGLHAAELYARILASLRTDGGAMYPTEYIYGKDRLVMSVKQEIEEGY
Sequences:
>Translated_221_residues MAHGFFFSTTLGVLLFSLQLFAATPKEAELVLDQAHQKMILLVEGLFNSGQITEIDKLLLVSDLNGYKTAYKTYSSAAAQ AHTYLKNKKQREDHYANKILYIASRLENLAANPAGNITDVTEEVTDFVPADSKCGVPVDLPCVAHEVELRMDTIYLNINK RNSKVRAKFKSVADRGLHAAELYARILASLRTDGGAMYPTEYIYGKDRLVMSVKQEIEEGY >Mature_220_residues AHGFFFSTTLGVLLFSLQLFAATPKEAELVLDQAHQKMILLVEGLFNSGQITEIDKLLLVSDLNGYKTAYKTYSSAAAQA HTYLKNKKQREDHYANKILYIASRLENLAANPAGNITDVTEEVTDFVPADSKCGVPVDLPCVAHEVELRMDTIYLNINKR NSKVRAKFKSVADRGLHAAELYARILASLRTDGGAMYPTEYIYGKDRLVMSVKQEIEEGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24658; Mature: 24526
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGFFFSTTLGVLLFSLQLFAATPKEAELVLDQAHQKMILLVEGLFNSGQITEIDKLLL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHH VSDLNGYKTAYKTYSSAAAQAHTYLKNKKQREDHYANKILYIASRLENLAANPAGNITDV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH TEEVTDFVPADSKCGVPVDLPCVAHEVELRMDTIYLNINKRNSKVRAKFKSVADRGLHAA HHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHCCCHHH ELYARILASLRTDGGAMYPTEYIYGKDRLVMSVKQEIEEGY HHHHHHHHHHHCCCCCCCCCHHEECCHHHHHHHHHHHHCCC >Mature Secondary Structure AHGFFFSTTLGVLLFSLQLFAATPKEAELVLDQAHQKMILLVEGLFNSGQITEIDKLLL CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHH VSDLNGYKTAYKTYSSAAAQAHTYLKNKKQREDHYANKILYIASRLENLAANPAGNITDV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH TEEVTDFVPADSKCGVPVDLPCVAHEVELRMDTIYLNINKRNSKVRAKFKSVADRGLHAA HHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHCCCHHH ELYARILASLRTDGGAMYPTEYIYGKDRLVMSVKQEIEEGY HHHHHHHHHHHCCCCCCCCCHHEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA