Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523388

Identifier: 42523388

GI number: 42523388

Start: 1826590

End: 1826898

Strand: Direct

Name: 42523388

Synonym: Bd1909

Alternate gene names: NA

Gene position: 1826590-1826898 (Clockwise)

Preceding gene: 42523387

Following gene: 42523389

Centisome position: 48.28

GC content: 53.72

Gene sequence:

>309_bases
ATGCGGATCCGGCAAGTGGGTTTTTCATCACGTCTGAAGGCTCATCGCAAACTTCTGACTCTGGAAACTTTGAAATTTAT
TGTCGAGTTCTTCAAGGACCGCGATGCCCGGATGGCGGCGTTGCGGTCGGGTGTGCCTGAAAGCTACGCCTCCCGGCAGG
GGCAGTGGCTTAAAAAGCATCCCATCGTACTTGCTGCGATGGAGGCGGATCTGGATGAACGTGACATGCTGAAGCTGGAA
AAAGCCCTGGCAGAGATCGACCGCCAGATGGAAATCTGCAAAGAGATTCTGGGCCTGCAGGACTTTTAG

Upstream 100 bases:

>100_bases
CCGCCATCGTGGAACAGTGGGCATGCGACCCGCTGGGAGGATTAGAGGGCTTGCGTCTTTTACGGTGAGATGAGAAGCTT
TTGCTTTTGGAGGCGTTCTT

Downstream 100 bases:

>100_bases
TTGTTATTGTATTTTCCCCGACAGGCTACCGCCTGATTATAATGTCACTAAACTGAGGGCAAAAGAGGTGACCTATGGCG
CACGGCTTTTTCTTTTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRIRQVGFSSRLKAHRKLLTLETLKFIVEFFKDRDARMAALRSGVPESYASRQGQWLKKHPIVLAAMEADLDERDMLKLE
KALAEIDRQMEICKEILGLQDF

Sequences:

>Translated_102_residues
MRIRQVGFSSRLKAHRKLLTLETLKFIVEFFKDRDARMAALRSGVPESYASRQGQWLKKHPIVLAAMEADLDERDMLKLE
KALAEIDRQMEICKEILGLQDF
>Mature_102_residues
MRIRQVGFSSRLKAHRKLLTLETLKFIVEFFKDRDARMAALRSGVPESYASRQGQWLKKHPIVLAAMEADLDERDMLKLE
KALAEIDRQMEICKEILGLQDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11891; Mature: 11891

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRQVGFSSRLKAHRKLLTLETLKFIVEFFKDRDARMAALRSGVPESYASRQGQWLKKH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCCCHHHHC
PIVLAAMEADLDERDMLKLEKALAEIDRQMEICKEILGLQDF
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIRQVGFSSRLKAHRKLLTLETLKFIVEFFKDRDARMAALRSGVPESYASRQGQWLKKH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCCCHHHHC
PIVLAAMEADLDERDMLKLEKALAEIDRQMEICKEILGLQDF
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA