| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523386
Identifier: 42523386
GI number: 42523386
Start: 1826040
End: 1826231
Strand: Direct
Name: 42523386
Synonym: Bd1907
Alternate gene names: NA
Gene position: 1826040-1826231 (Clockwise)
Preceding gene: 42523385
Following gene: 42523387
Centisome position: 48.27
GC content: 46.35
Gene sequence:
>192_bases ATGGCAACCAATAAAAACTTTAACGAAAGAAACGCGGAAAAAACCGGCAGCACAAAACAGCCTGCCAGCAAACCCGCAGA ACGAACCGAAAGAACTGAAAGAACACAACAGCCTTCCCATAAAGAAGGCGATAACAGAAGTTCCCGCTCAACCACAGAAA GATACTCACGCGATGAGGAATCGGAAGAGTAG
Upstream 100 bases:
>100_bases TCTGGATACTGGACCTTTGATATCGCTGCTTTTGTACACCGGTCCAGCACCATCTGACTCTCCGGGGCTTATCATAGGGT AGGTTTAAAGGGAGGTCTTT
Downstream 100 bases:
>100_bases TGACTTTTAGTTTAAGGCAATAGAGAGGCACCCATAGCCTCTCTTTTGTTGTGGAGGTGTCTTATGAAAGAAGCAATGTC TGTGGCGCCAGCATCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MATNKNFNERNAEKTGSTKQPASKPAERTERTERTQQPSHKEGDNRSSRSTTERYSRDEESEE
Sequences:
>Translated_63_residues MATNKNFNERNAEKTGSTKQPASKPAERTERTERTQQPSHKEGDNRSSRSTTERYSRDEESEE >Mature_62_residues ATNKNFNERNAEKTGSTKQPASKPAERTERTERTQQPSHKEGDNRSSRSTTERYSRDEESEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7288; Mature: 7157
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNKNFNERNAEKTGSTKQPASKPAERTERTERTQQPSHKEGDNRSSRSTTERYSRDEE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC SEE CCC >Mature Secondary Structure ATNKNFNERNAEKTGSTKQPASKPAERTERTERTQQPSHKEGDNRSSRSTTERYSRDEE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC SEE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA