Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523385

Identifier: 42523385

GI number: 42523385

Start: 1825246

End: 1825623

Strand: Direct

Name: 42523385

Synonym: Bd1906

Alternate gene names: NA

Gene position: 1825246-1825623 (Clockwise)

Preceding gene: 42523384

Following gene: 42523386

Centisome position: 48.25

GC content: 48.15

Gene sequence:

>378_bases
ATGCTTCTGACTGCTTTTGTTTCTTTGTTGTCTTTGTCTGTGACGGCGCAAGCCGCTGTTATGCAGGTGGACTGTGTTGG
TGGTGACACCCAGATTACTGCCAACCTGATTGTTGAAGGTCGCAAGGTGACAGGTTTTGTGGCTGCGGCAGGTGCCGGCG
TTGAAGCTTTCCAGGCAGATGCCCATGGCTCCTACATCTTCTACAAAGCGGGTGAGTACTACACAGATTTCGATCTTGAG
ATCATCGAGTTCTGGGGCATTTCCGGTGATCAGTCTGTAGGCTACAAGTCCTACACCGATAAAAACGGCAAATTTGTTCA
AACTGTTCTTGTGAATAAAAAAGCCGTTAATGCCCAGTGCATGATCGGTAAGCAATAG

Upstream 100 bases:

>100_bases
TTCAGAGCTGCGGCATCTATTGAGCCGGGCATCTATTGTTCGTATAGTTTTTGGCGTGAATAGAGAATTGGAAATTTTAA
CGAAAGGTTTTCCTGTGAAA

Downstream 100 bases:

>100_bases
TCCTTCGAATGCAAGGATGACTTTAATTAAGGCGTGGGGGACCCCTCTGCGCCTTTTTTATTGGTTTTCAGTCATGCAAA
ACACGCATATCTGGATTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLLTAFVSLLSLSVTAQAAVMQVDCVGGDTQITANLIVEGRKVTGFVAAAGAGVEAFQADAHGSYIFYKAGEYYTDFDLE
IIEFWGISGDQSVGYKSYTDKNGKFVQTVLVNKKAVNAQCMIGKQ

Sequences:

>Translated_125_residues
MLLTAFVSLLSLSVTAQAAVMQVDCVGGDTQITANLIVEGRKVTGFVAAAGAGVEAFQADAHGSYIFYKAGEYYTDFDLE
IIEFWGISGDQSVGYKSYTDKNGKFVQTVLVNKKAVNAQCMIGKQ
>Mature_125_residues
MLLTAFVSLLSLSVTAQAAVMQVDCVGGDTQITANLIVEGRKVTGFVAAAGAGVEAFQADAHGSYIFYKAGEYYTDFDLE
IIEFWGISGDQSVGYKSYTDKNGKFVQTVLVNKKAVNAQCMIGKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13376; Mature: 13376

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTAFVSLLSLSVTAQAAVMQVDCVGGDTQITANLIVEGRKVTGFVAAAGAGVEAFQAD
CHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEEEEEECCEEEEEEEECCCCCEEEECC
AHGSYIFYKAGEYYTDFDLEIIEFWGISGDQSVGYKSYTDKNGKFVQTVLVNKKAVNAQC
CCCCEEEEECCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
MIGKQ
EEECC
>Mature Secondary Structure
MLLTAFVSLLSLSVTAQAAVMQVDCVGGDTQITANLIVEGRKVTGFVAAAGAGVEAFQAD
CHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEEEEEECCEEEEEEEECCCCCEEEECC
AHGSYIFYKAGEYYTDFDLEIIEFWGISGDQSVGYKSYTDKNGKFVQTVLVNKKAVNAQC
CCCCEEEEECCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
MIGKQ
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA