| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523331
Identifier: 42523331
GI number: 42523331
Start: 1774647
End: 1775030
Strand: Direct
Name: 42523331
Synonym: Bd1847
Alternate gene names: NA
Gene position: 1774647-1775030 (Clockwise)
Preceding gene: 42523330
Following gene: 42523333
Centisome position: 46.91
GC content: 46.35
Gene sequence:
>384_bases ATGAGTAAATTTCGTCTGGCGCTGGGGTCGGCCTCTTGTCGTGATAATAAAAGCAAAGATCCGCAAGTGCAGGAAGTCTG TCGCATTCTTTTGGAAAAGCTGGAGGCCTTGAAGTCCTCTGATCCTATTTTCTTGAAAAGCTTCCCTCTGGATCACAGTG AAATCATGGAAATCAACGGCCGCGAAGTGCTGATGACCGTGTTTCATGATCGTCTGCCAAAGGAAGAATCCCTGCTGGTG ATTCAGGCCTATTATTCAACCTGGAAGTTTCCAAATTTTATTTCTTTAAGCGGGGTCGGGAAGGTCTTTGCTGAGGGCTT TTTGCTGAATAAGACCGGTGAAGTGAAAGAAGCCCCGGAATCCCTTTTGTGGGATTATCGTTAG
Upstream 100 bases:
>100_bases AAAAGCTTTCAGGAGTTCTGGCCTCTGTTCTGACGAAGCAATGGAACCTGCGGGGGGATTTTAAAATGTTCTATCAGATG TGTGCAGGAAAGCTTTGGTC
Downstream 100 bases:
>100_bases GGGCTTTTTTTAGTTGCGAACCACATTCCAGGTCGTGCCTTCCAAGGAGCTTCGCAGTTTCACGCGCGAGCTTCCGGTGT CCACAGAAATTTGAATCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSKFRLALGSASCRDNKSKDPQVQEVCRILLEKLEALKSSDPIFLKSFPLDHSEIMEINGREVLMTVFHDRLPKEESLLV IQAYYSTWKFPNFISLSGVGKVFAEGFLLNKTGEVKEAPESLLWDYR
Sequences:
>Translated_127_residues MSKFRLALGSASCRDNKSKDPQVQEVCRILLEKLEALKSSDPIFLKSFPLDHSEIMEINGREVLMTVFHDRLPKEESLLV IQAYYSTWKFPNFISLSGVGKVFAEGFLLNKTGEVKEAPESLLWDYR >Mature_126_residues SKFRLALGSASCRDNKSKDPQVQEVCRILLEKLEALKSSDPIFLKSFPLDHSEIMEINGREVLMTVFHDRLPKEESLLVI QAYYSTWKFPNFISLSGVGKVFAEGFLLNKTGEVKEAPESLLWDYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14542; Mature: 14411
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFRLALGSASCRDNKSKDPQVQEVCRILLEKLEALKSSDPIFLKSFPLDHSEIMEING CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHEECCC REVLMTVFHDRLPKEESLLVIQAYYSTWKFPNFISLSGVGKVFAEGFLLNKTGEVKEAPE CHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCEEECCHHHHHHHCCEEECCCCCCHHCHH SLLWDYR HHCCCCC >Mature Secondary Structure SKFRLALGSASCRDNKSKDPQVQEVCRILLEKLEALKSSDPIFLKSFPLDHSEIMEING CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHEECCC REVLMTVFHDRLPKEESLLVIQAYYSTWKFPNFISLSGVGKVFAEGFLLNKTGEVKEAPE CHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCEEECCHHHHHHHCCEEECCCCCCHHCHH SLLWDYR HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA