| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523307
Identifier: 42523307
GI number: 42523307
Start: 1748482
End: 1749087
Strand: Direct
Name: 42523307
Synonym: Bd1821
Alternate gene names: NA
Gene position: 1748482-1749087 (Clockwise)
Preceding gene: 42523306
Following gene: 42523311
Centisome position: 46.22
GC content: 49.83
Gene sequence:
>606_bases ATGGAATCCGCATTTGTTCCCAGCACCTGGAGACGTTTATTTGCCCATGGCATCGATCAGATCATCAGTTTGCCATTTTA TCTGCCGTTTGCCGGTGTGTTCTTAAAACTGATCTTCACTGAAGATGATGTCATCGTGACGCTGTTGCAGTTGTTTTTGA TGTTTTTGATCCCTGCGGTTTATGAGTTTGTGTTTTTGGTGATGATGCAGGCCACGCCAGGGAAATGGTTTATGGGTCTG AAAGTGGTGCCGGCCAACAACTTTACAGAAAAACTGCATTGGTCCCAGTGCCTGATGCGTCCGTTGACGGGGCGTTTGAG TTTCTTTTTCTCCTGGGGGATTTATGCCCTGGCGTTTTTCCGTTATGATCGCACGCATCTGTGTGACTGGGCGGCGGAAA CCCGCGTGGTGCAGGACAAACCCCGCACCACTCAGGCTCGCCTGCGCTGGTTGACGGGATTGTTGTTTGTGGTGCTTTAT TCCTATGAAGGGCTGGTTTCGGCCCGGATGATCATGCAGTCCATTGATTGGTCGGAACGTCAGGCAAACCTGCGTGAGGT CTTTGATCTTCAGGACTATATGGATGTGACTTTCGAAGAGGATTAG
Upstream 100 bases:
>100_bases CCTGGACAAAGCCTTTGAACAGCAGCTGGAGCGTCAGTTGCAAAGCCGCGATGAAGCTTTGTTGTGGCTGAAAAAATATC TGGAAAGAGAGTCATCTTAA
Downstream 100 bases:
>100_bases GCCGCCGGTTTCCATTTTTTGAAAATGGTTGTGGTCAAAAGAAGATCCACATTACCGGATCCGGACAGGGCTTCGTCCCG CAGGTCCTGGATGGCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MESAFVPSTWRRLFAHGIDQIISLPFYLPFAGVFLKLIFTEDDVIVTLLQLFLMFLIPAVYEFVFLVMMQATPGKWFMGL KVVPANNFTEKLHWSQCLMRPLTGRLSFFFSWGIYALAFFRYDRTHLCDWAAETRVVQDKPRTTQARLRWLTGLLFVVLY SYEGLVSARMIMQSIDWSERQANLREVFDLQDYMDVTFEED
Sequences:
>Translated_201_residues MESAFVPSTWRRLFAHGIDQIISLPFYLPFAGVFLKLIFTEDDVIVTLLQLFLMFLIPAVYEFVFLVMMQATPGKWFMGL KVVPANNFTEKLHWSQCLMRPLTGRLSFFFSWGIYALAFFRYDRTHLCDWAAETRVVQDKPRTTQARLRWLTGLLFVVLY SYEGLVSARMIMQSIDWSERQANLREVFDLQDYMDVTFEED >Mature_201_residues MESAFVPSTWRRLFAHGIDQIISLPFYLPFAGVFLKLIFTEDDVIVTLLQLFLMFLIPAVYEFVFLVMMQATPGKWFMGL KVVPANNFTEKLHWSQCLMRPLTGRLSFFFSWGIYALAFFRYDRTHLCDWAAETRVVQDKPRTTQARLRWLTGLLFVVLY SYEGLVSARMIMQSIDWSERQANLREVFDLQDYMDVTFEED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23718; Mature: 23718
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESAFVPSTWRRLFAHGIDQIISLPFYLPFAGVFLKLIFTEDDVIVTLLQLFLMFLIPAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YEFVFLVMMQATPGKWFMGLKVVPANNFTEKLHWSQCLMRPLTGRLSFFFSWGIYALAFF HHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYDRTHLCDWAAETRVVQDKPRTTQARLRWLTGLLFVVLYSYEGLVSARMIMQSIDWSER HCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QANLREVFDLQDYMDVTFEED HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MESAFVPSTWRRLFAHGIDQIISLPFYLPFAGVFLKLIFTEDDVIVTLLQLFLMFLIPAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YEFVFLVMMQATPGKWFMGLKVVPANNFTEKLHWSQCLMRPLTGRLSFFFSWGIYALAFF HHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYDRTHLCDWAAETRVVQDKPRTTQARLRWLTGLLFVVLYSYEGLVSARMIMQSIDWSER HCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QANLREVFDLQDYMDVTFEED HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA