| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523236
Identifier: 42523236
GI number: 42523236
Start: 1675389
End: 1675910
Strand: Direct
Name: 42523236
Synonym: Bd1742
Alternate gene names: NA
Gene position: 1675389-1675910 (Clockwise)
Preceding gene: 42523235
Following gene: 42523237
Centisome position: 44.29
GC content: 53.26
Gene sequence:
>522_bases ATGAAGTTACTTCTGTTGATCGCATTTTCGCTTCTGTTGGGGTGTCAAACCCGTCCGGGTCCTATTCAGATTGATCTGCC TCAGTTGAAGTCTTATTTGACTCAGAAAAATGAAGTCGCCCCGTGGAGCAGTAAAGCTCGCACGGCATCCTTGGGGGGAC GTGCCCCCAGTCAGCAATTAGCACCGACCTTCGGAATGCCTTTCAGTCAGGCCAAACACAAGGCCCATGTTCTGGATGTG CGCAGCGAAGCGGATTTTGCGCAGTTTAATATGAGCATGGATCCCAGCACCCAAATGCCCGTCAGTAATATTCCGGCCTT CGTGTTAAAACCTTTGTCGCCGGAGGCGGCTGTAAAGGTGATCGGAGAAAAGGGCATGACGGCGGATTCGATCATTATCG TGGTTTGCAGTCAGGGGGCGGGGGCTCCGGATATCGCTCAGCAGATTTTCACTTGGGGCTTTCCCCGGGTGTTGAATTAT TCCGGCGGTTATTCCGGACTGCCAGGCTGCCGGGGACAGTAA
Upstream 100 bases:
>100_bases TCGAATTTCAAAAGGGAGCTGATTCAGCTCCCTTTTTTTATTTCTAAACTCCTGTAAAAGACAAAGTGCCGCGACTCTGA ACCCGGCGTATGCTTTTTCT
Downstream 100 bases:
>100_bases TATTTTCCAACCAACTATAAACAAAAAGTCTTTTCTTTGTGTTCGATGAAAATGCCCGTATATGAATTGCACTCAATTAA ATTCAACGGAGCCTTGGATG
Product: putative sulfurylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKLLLLIAFSLLLGCQTRPGPIQIDLPQLKSYLTQKNEVAPWSSKARTASLGGRAPSQQLAPTFGMPFSQAKHKAHVLDV RSEADFAQFNMSMDPSTQMPVSNIPAFVLKPLSPEAAVKVIGEKGMTADSIIIVVCSQGAGAPDIAQQIFTWGFPRVLNY SGGYSGLPGCRGQ
Sequences:
>Translated_173_residues MKLLLLIAFSLLLGCQTRPGPIQIDLPQLKSYLTQKNEVAPWSSKARTASLGGRAPSQQLAPTFGMPFSQAKHKAHVLDV RSEADFAQFNMSMDPSTQMPVSNIPAFVLKPLSPEAAVKVIGEKGMTADSIIIVVCSQGAGAPDIAQQIFTWGFPRVLNY SGGYSGLPGCRGQ >Mature_173_residues MKLLLLIAFSLLLGCQTRPGPIQIDLPQLKSYLTQKNEVAPWSSKARTASLGGRAPSQQLAPTFGMPFSQAKHKAHVLDV RSEADFAQFNMSMDPSTQMPVSNIPAFVLKPLSPEAAVKVIGEKGMTADSIIIVVCSQGAGAPDIAQQIFTWGFPRVLNY SGGYSGLPGCRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18517; Mature: 18517
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLLIAFSLLLGCQTRPGPIQIDLPQLKSYLTQKNEVAPWSSKARTASLGGRAPSQQL CHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC APTFGMPFSQAKHKAHVLDVRSEADFAQFNMSMDPSTQMPVSNIPAFVLKPLSPEAAVKV CCCCCCCHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCHHHCCCEEECCCCHHHHHHH IGEKGMTADSIIIVVCSQGAGAPDIAQQIFTWGFPRVLNYSGGYSGLPGCRGQ HCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCCCCCC >Mature Secondary Structure MKLLLLIAFSLLLGCQTRPGPIQIDLPQLKSYLTQKNEVAPWSSKARTASLGGRAPSQQL CHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC APTFGMPFSQAKHKAHVLDVRSEADFAQFNMSMDPSTQMPVSNIPAFVLKPLSPEAAVKV CCCCCCCHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCHHHCCCEEECCCCHHHHHHH IGEKGMTADSIIIVVCSQGAGAPDIAQQIFTWGFPRVLNYSGGYSGLPGCRGQ HCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA