| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523215
Identifier: 42523215
GI number: 42523215
Start: 1655289
End: 1655675
Strand: Direct
Name: 42523215
Synonym: Bd1719
Alternate gene names: NA
Gene position: 1655289-1655675 (Clockwise)
Preceding gene: 42523214
Following gene: 42523216
Centisome position: 43.76
GC content: 48.06
Gene sequence:
>387_bases ATGGGAAAATGGATTGCAGCAGTTTTGATTCTTTGTTTTGCCAATATATCAATCGCCAAGGGGCCGAATGACGTCTGCGC CCAGGATCGCGAAACACTGTGCGGAAAAGTCGAGCGTGGTGAGGGCCGTGTGCTGAAGTGCATGATGGAAAACAAGGACA AGCTGTCAGCCGACTGTAAGGCTAAGTTCGAGAAAATGAAAGATCACGCGATGGAGATGAAAGATGCCTGTCACGAGGAT CATGAAAAGTTCTGCGCGAATGCCTCTGGAGGCAAGGGTCGCAAAATGAAATGCATGATGGAACATAAAGATGAACTGTC TGCAGACTGCAGGGCGCAAATGGAAAACATGAAGGACGCCCGCAAGAAAATGAGAAAGGGTAACTAA
Upstream 100 bases:
>100_bases ATCCCAAGGTCCAGCCGTACAGAAAGGACCAACAAGACCTCAAGCTCTTTGTCGGACTTCCCGGGCTGCTCTAAGATGAT TATCTAGAGGGGGTACTCAT
Downstream 100 bases:
>100_bases AGAACCTTATGCGCGAAAGAAGTCTTAGACTCAGTCTTTTCGACGCTTTTCTTTGTTCACTGATGATTGGAGCCGGCGAA ACTTATTTGCCGGCTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MGKWIAAVLILCFANISIAKGPNDVCAQDRETLCGKVERGEGRVLKCMMENKDKLSADCKAKFEKMKDHAMEMKDACHED HEKFCANASGGKGRKMKCMMEHKDELSADCRAQMENMKDARKKMRKGN
Sequences:
>Translated_128_residues MGKWIAAVLILCFANISIAKGPNDVCAQDRETLCGKVERGEGRVLKCMMENKDKLSADCKAKFEKMKDHAMEMKDACHED HEKFCANASGGKGRKMKCMMEHKDELSADCRAQMENMKDARKKMRKGN >Mature_127_residues GKWIAAVLILCFANISIAKGPNDVCAQDRETLCGKVERGEGRVLKCMMENKDKLSADCKAKFEKMKDHAMEMKDACHEDH EKFCANASGGKGRKMKCMMEHKDELSADCRAQMENMKDARKKMRKGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14449; Mature: 14318
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 9.4 %Met (Translated Protein) 16.4 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 8.7 %Met (Mature Protein) 15.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWIAAVLILCFANISIAKGPNDVCAQDRETLCGKVERGEGRVLKCMMENKDKLSADCK CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHCCHHHH AKFEKMKDHAMEMKDACHEDHEKFCANASGGKGRKMKCMMEHKDELSADCRAQMENMKDA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH RKKMRKGN HHHHHCCC >Mature Secondary Structure GKWIAAVLILCFANISIAKGPNDVCAQDRETLCGKVERGEGRVLKCMMENKDKLSADCK CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHCCHHHH AKFEKMKDHAMEMKDACHEDHEKFCANASGGKGRKMKCMMEHKDELSADCRAQMENMKDA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH RKKMRKGN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA