| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is capG [H]
Identifier: 42523192
GI number: 42523192
Start: 1631542
End: 1632669
Strand: Direct
Name: capG [H]
Synonym: Bd1695
Alternate gene names: 42523192
Gene position: 1631542-1632669 (Clockwise)
Preceding gene: 42523191
Following gene: 42523193
Centisome position: 43.13
GC content: 43.35
Gene sequence:
>1128_bases TTGAAGAAAATGAAAGTAATGACAGTTTTAGGTACCAGACCTGAGATTATTCGGTTGTCCCGGGTTTTGGCTAAATTAGA TCAACACTGTGAACATAAAATAGTCCACACAGGTCAAAATTATGATTTTGAATTGAACGAGATTTTCTTTCAGGACCTCG GTGTGCGAAAGCCGGATTTCTTCTTGAATGCAGCGGGAGAATCTGCGACCGAAACAATTGGTAATATCATCAAAACCGTA GATAAAGTTATGGGTGAATTTCTGCCCGAGGCAGTGCTAGTTTTGGGCGATACTAACAGTTGTCTATCTGTGATCGCGGC AAAACGTCGGAAAGTTCCTATTTTTCATATGGAAGCAGGCAATCGATGTTTTGATCAAAGAGTTCCTGAAGAGACCAATA GAAAGATCGTAGATCATACGGCCGATATCAATCTGACTTATAGCTCGATTGCGCGAGAATACCTCTTGCGCGAAGGACTG CCGCCTGATCGTGTGATTAAGACTGGCAGCCCCATGTTTGAAGTGCTTACTCATTATCGAAAACAGATTGACTCCTCAGA TGTACTATCCCGACTTGGATTGAAGTCTGGGCAGTACTTTGTGGTCAGCGCTCACCGTGAAGAGAATATTGAGTCCGATG TAAACTTTGATAAATTGGTGGAATCTCTCAATCTTGTAGCTGAAACATTCGATATCCCTGTGGTAGTGAGCACTCATCCG AGAACTCAGAACCGCATCGACAAAAGGGGAAGTAAGTTCCATTCCAATGTCAGATTGCTGAAGCCTCTTGGATTTAGTGA TTACAATCATCTTCAGCTTCATGCGCGAGCAGTTCTTTCTGATAGTGGTACTATCACTGAAGAATCTTCTATCATGAATT TCCCTGCGCTGAATATCCGGGAAGCGCATGAACGTCCTGAAGGATTTGAAGAGGCTTCGGTGATGATGGTGGGGTTGGAT AAAATCCGCATTATGCAGGCATTGCGGATTCTTGAAACACAACCTCGCGCGGATGATCGATTGTTGCGACAGGTGGCGGA TTATTCGATGCCAAACGTATCAGACAAGGTGGTTCGAATTATTCAGAGCTATACAGATTATGTGAATAGGGTTGTTTGGC GTAAATAA
Upstream 100 bases:
>100_bases GACATTACCAATATTGGCAACGAAGAGTTGGTAGTTATGTTATGGGCCAATGAGATTTTTGATCGCGCAAAACCTGATAC GGTAGCGCACGAGGTTTAGT
Downstream 100 bases:
>100_bases TGAATATTCTGATTGTTACACAGTACTTTTTTCCGGAGACCTTCATTATCAATGACTTGGTTGTTGAGATGGAAAAGCAA GGTCACAATGTGACAGTCTT
Product: capsular polysaccharide synthesis enzyme Cap5G
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDFFLNAAGESATETIGNIIKTV DKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAGNRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGL PPDRVIKTGSPMFEVLTHYRKQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIREAHERPEGFEEASVMMVGLD KIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRIIQSYTDYVNRVVWRK
Sequences:
>Translated_375_residues MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDFFLNAAGESATETIGNIIKTV DKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAGNRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGL PPDRVIKTGSPMFEVLTHYRKQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIREAHERPEGFEEASVMMVGLD KIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRIIQSYTDYVNRVVWRK >Mature_375_residues MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDFFLNAAGESATETIGNIIKTV DKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAGNRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGL PPDRVIKTGSPMFEVLTHYRKQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIREAHERPEGFEEASVMMVGLD KIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRIIQSYTDYVNRVVWRK
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=341, Percent_Identity=32.5513196480938, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 42823; Mature: 42823
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDF CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCC FLNAAGESATETIGNIIKTVDKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAG EEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCC NRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGLPPDRVIKTGSPMFEVLTHYR CHHHHHCCCHHHCCCHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH KQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP HHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIR CHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH EAHERPEGFEEASVMMVGLDKIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRI HHHCCCCCHHHHHEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH IQSYTDYVNRVVWRK HHHHHHHHHHHHCCC >Mature Secondary Structure MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDF CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCC FLNAAGESATETIGNIIKTVDKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAG EEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCC NRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGLPPDRVIKTGSPMFEVLTHYR CHHHHHCCCHHHCCCHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH KQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP HHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIR CHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH EAHERPEGFEEASVMMVGLDKIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRI HHHCCCCCHHHHHEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH IQSYTDYVNRVVWRK HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]