Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is capG [H]

Identifier: 42523192

GI number: 42523192

Start: 1631542

End: 1632669

Strand: Direct

Name: capG [H]

Synonym: Bd1695

Alternate gene names: 42523192

Gene position: 1631542-1632669 (Clockwise)

Preceding gene: 42523191

Following gene: 42523193

Centisome position: 43.13

GC content: 43.35

Gene sequence:

>1128_bases
TTGAAGAAAATGAAAGTAATGACAGTTTTAGGTACCAGACCTGAGATTATTCGGTTGTCCCGGGTTTTGGCTAAATTAGA
TCAACACTGTGAACATAAAATAGTCCACACAGGTCAAAATTATGATTTTGAATTGAACGAGATTTTCTTTCAGGACCTCG
GTGTGCGAAAGCCGGATTTCTTCTTGAATGCAGCGGGAGAATCTGCGACCGAAACAATTGGTAATATCATCAAAACCGTA
GATAAAGTTATGGGTGAATTTCTGCCCGAGGCAGTGCTAGTTTTGGGCGATACTAACAGTTGTCTATCTGTGATCGCGGC
AAAACGTCGGAAAGTTCCTATTTTTCATATGGAAGCAGGCAATCGATGTTTTGATCAAAGAGTTCCTGAAGAGACCAATA
GAAAGATCGTAGATCATACGGCCGATATCAATCTGACTTATAGCTCGATTGCGCGAGAATACCTCTTGCGCGAAGGACTG
CCGCCTGATCGTGTGATTAAGACTGGCAGCCCCATGTTTGAAGTGCTTACTCATTATCGAAAACAGATTGACTCCTCAGA
TGTACTATCCCGACTTGGATTGAAGTCTGGGCAGTACTTTGTGGTCAGCGCTCACCGTGAAGAGAATATTGAGTCCGATG
TAAACTTTGATAAATTGGTGGAATCTCTCAATCTTGTAGCTGAAACATTCGATATCCCTGTGGTAGTGAGCACTCATCCG
AGAACTCAGAACCGCATCGACAAAAGGGGAAGTAAGTTCCATTCCAATGTCAGATTGCTGAAGCCTCTTGGATTTAGTGA
TTACAATCATCTTCAGCTTCATGCGCGAGCAGTTCTTTCTGATAGTGGTACTATCACTGAAGAATCTTCTATCATGAATT
TCCCTGCGCTGAATATCCGGGAAGCGCATGAACGTCCTGAAGGATTTGAAGAGGCTTCGGTGATGATGGTGGGGTTGGAT
AAAATCCGCATTATGCAGGCATTGCGGATTCTTGAAACACAACCTCGCGCGGATGATCGATTGTTGCGACAGGTGGCGGA
TTATTCGATGCCAAACGTATCAGACAAGGTGGTTCGAATTATTCAGAGCTATACAGATTATGTGAATAGGGTTGTTTGGC
GTAAATAA

Upstream 100 bases:

>100_bases
GACATTACCAATATTGGCAACGAAGAGTTGGTAGTTATGTTATGGGCCAATGAGATTTTTGATCGCGCAAAACCTGATAC
GGTAGCGCACGAGGTTTAGT

Downstream 100 bases:

>100_bases
TGAATATTCTGATTGTTACACAGTACTTTTTTCCGGAGACCTTCATTATCAATGACTTGGTTGTTGAGATGGAAAAGCAA
GGTCACAATGTGACAGTCTT

Product: capsular polysaccharide synthesis enzyme Cap5G

Products: NA

Alternate protein names: UDP-GlcNAc-2-epimerase [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDFFLNAAGESATETIGNIIKTV
DKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAGNRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGL
PPDRVIKTGSPMFEVLTHYRKQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP
RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIREAHERPEGFEEASVMMVGLD
KIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRIIQSYTDYVNRVVWRK

Sequences:

>Translated_375_residues
MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDFFLNAAGESATETIGNIIKTV
DKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAGNRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGL
PPDRVIKTGSPMFEVLTHYRKQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP
RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIREAHERPEGFEEASVMMVGLD
KIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRIIQSYTDYVNRVVWRK
>Mature_375_residues
MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDFFLNAAGESATETIGNIIKTV
DKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAGNRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGL
PPDRVIKTGSPMFEVLTHYRKQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP
RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIREAHERPEGFEEASVMMVGLD
KIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRIIQSYTDYVNRVVWRK

Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]

COG id: COG0381

COG function: function code M; UDP-N-acetylglucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI48994967, Length=341, Percent_Identity=32.5513196480938, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003331 [H]

Pfam domain/function: PF02350 Epimerase_2 [H]

EC number: =5.1.3.14 [H]

Molecular weight: Translated: 42823; Mature: 42823

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDF
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCC
FLNAAGESATETIGNIIKTVDKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAG
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCC
NRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGLPPDRVIKTGSPMFEVLTHYR
CHHHHHCCCHHHCCCHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH
KQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP
HHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIR
CHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
EAHERPEGFEEASVMMVGLDKIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRI
HHHCCCCCHHHHHEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
IQSYTDYVNRVVWRK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKMKVMTVLGTRPEIIRLSRVLAKLDQHCEHKIVHTGQNYDFELNEIFFQDLGVRKPDF
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCC
FLNAAGESATETIGNIIKTVDKVMGEFLPEAVLVLGDTNSCLSVIAAKRRKVPIFHMEAG
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCC
NRCFDQRVPEETNRKIVDHTADINLTYSSIAREYLLREGLPPDRVIKTGSPMFEVLTHYR
CHHHHHCCCHHHCCCHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH
KQIDSSDVLSRLGLKSGQYFVVSAHREENIESDVNFDKLVESLNLVAETFDIPVVVSTHP
HHCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
RTQNRIDKRGSKFHSNVRLLKPLGFSDYNHLQLHARAVLSDSGTITEESSIMNFPALNIR
CHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
EAHERPEGFEEASVMMVGLDKIRIMQALRILETQPRADDRLLRQVADYSMPNVSDKVVRI
HHHCCCCCHHHHHEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
IQSYTDYVNRVVWRK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]