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The map label for this gene is 42523185

Identifier: 42523185

GI number: 42523185

Start: 1624303

End: 1625571

Strand: Direct

Name: 42523185

Synonym: Bd1688

Alternate gene names: NA

Gene position: 1624303-1625571 (Clockwise)

Preceding gene: 42523184

Following gene: 42523186

Centisome position: 42.94

GC content: 39.16

Gene sequence:

>1269_bases
ATGAGTTCCATATCAATTAGATCTTTAGGAATTAGCTCTTTGACATATCTTTTTTCTGGCGTATTAAGCGCAGTTGTGCC
GTTTCTTGCGCTCCCATTTTTTACGAAATATCTGTCTGCTGATGAATATGGTTTAGTGGGGTTATTCCAGGGTGTATTTA
CGATTTTTCTCGCAGTTGTCGGTCTTGGCGTGGCGGGATCAGTTGTCAAAAAGAGAGGTGATCTGAACGACCATGAGTTT
GGTGTGTATAATTTCAACCTACTCCTGATTTGGTTGGCGAGTGGGGTAGTGATTGCGTTTCTAGTTGCATTGCTGAATCC
GTATTTAACTGGGTACTTTGTTGTTTCTTCTTTTGTGATATGGGCCGGATTTTTTTATGCGTTCTTTACTTTCGCAACTA
ACATTCAGTTGGCCATCCTTCAATCGGAAAACAAAAGTTATACTTATAGCTTTATTCAGGTGATGAGTGTAGTTCTGAAT
GTTTTGTTGGGTGTGATTGCTGTTCGATACTTTATGGCTAGCGGAGAGAGTCGAGTTCTGTCGATGGTTATTGCATCAGT
TGTTATGGCTTTTTGTTCAATAATTTTTATTGTTAAAAGCAAGAGAGTTATATTTTTCTATAATGTGGAGCATATTAAGA
TGGCAATGCGCTTCGGTGTTCCGCTTATGCCTCACGGTCTTACAATATTTTTGAGTAATTGGGCTTCGCTGTTTGTGTTA
AAGATGTTTGTTGATGCAGATTCTGTGGGCATATATCTTTTTGCTTTCCAACTTTCAATGGTACTCGGGGTTGCCTGTGA
TGCCTTTAATCGCGCATATGTACCATGGCTTTTTTCGCATCTAAAGGTCAATCTTTTTAAAGATAAGGTGCGAATAGTTA
AAGTCACATATGTTCATTTTGTCGTTACTCTAGGTGTTGCAATATCATCTTTTTATTTGGGGCCGACTTTTATTAAGTTT
GTGTTCAGTAGAGAATATTGGGAATCTGCCGAGATTGTCGGCATTCTGGTGTTAGGTCAGGCATTTGGTGGGATGTATTT
GATGGTGACAAATTATTTATTCTTTATGGAGCGCACGACTATTTTGTCCGCTGTGACAATATCTACGAATATTTTAGGTC
TTGGGTTGTGCTTTTTGCTCGTACAAGACTTTGGCTTAGTTGGCGCTGCGTACGCTTTTTTATTCACAAGAGTTATCTCG
TTCGTTTTTGTGTGGATAGCGTCTAGCCGAATTTATAATATGCCATGGTTTTTACGGACTACAGCATGA

Upstream 100 bases:

>100_bases
TTGTTGTGTTTTTTTGCCTCCTCAGTGATTTGCATAATTTATGTATGTATTCCCATGTCAGAGTTACGTTTGAAGCCTTC
AAATATTAAGAGCTAATGGC

Downstream 100 bases:

>100_bases
ATATGTTTGCACGGTTTTTAGGTTTTTCTACTTTTTGTCGAGATGAGAAGTTCGAAGTTGTTTCTGTCTCATTATTTCTT
TTTTTGACGTTTTTTTTGTT

Product: putative polysaccharide biosynthesis protein CpsL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSSISIRSLGISSLTYLFSGVLSAVVPFLALPFFTKYLSADEYGLVGLFQGVFTIFLAVVGLGVAGSVVKKRGDLNDHEF
GVYNFNLLLIWLASGVVIAFLVALLNPYLTGYFVVSSFVIWAGFFYAFFTFATNIQLAILQSENKSYTYSFIQVMSVVLN
VLLGVIAVRYFMASGESRVLSMVIASVVMAFCSIIFIVKSKRVIFFYNVEHIKMAMRFGVPLMPHGLTIFLSNWASLFVL
KMFVDADSVGIYLFAFQLSMVLGVACDAFNRAYVPWLFSHLKVNLFKDKVRIVKVTYVHFVVTLGVAISSFYLGPTFIKF
VFSREYWESAEIVGILVLGQAFGGMYLMVTNYLFFMERTTILSAVTISTNILGLGLCFLLVQDFGLVGAAYAFLFTRVIS
FVFVWIASSRIYNMPWFLRTTA

Sequences:

>Translated_422_residues
MSSISIRSLGISSLTYLFSGVLSAVVPFLALPFFTKYLSADEYGLVGLFQGVFTIFLAVVGLGVAGSVVKKRGDLNDHEF
GVYNFNLLLIWLASGVVIAFLVALLNPYLTGYFVVSSFVIWAGFFYAFFTFATNIQLAILQSENKSYTYSFIQVMSVVLN
VLLGVIAVRYFMASGESRVLSMVIASVVMAFCSIIFIVKSKRVIFFYNVEHIKMAMRFGVPLMPHGLTIFLSNWASLFVL
KMFVDADSVGIYLFAFQLSMVLGVACDAFNRAYVPWLFSHLKVNLFKDKVRIVKVTYVHFVVTLGVAISSFYLGPTFIKF
VFSREYWESAEIVGILVLGQAFGGMYLMVTNYLFFMERTTILSAVTISTNILGLGLCFLLVQDFGLVGAAYAFLFTRVIS
FVFVWIASSRIYNMPWFLRTTA
>Mature_421_residues
SSISIRSLGISSLTYLFSGVLSAVVPFLALPFFTKYLSADEYGLVGLFQGVFTIFLAVVGLGVAGSVVKKRGDLNDHEFG
VYNFNLLLIWLASGVVIAFLVALLNPYLTGYFVVSSFVIWAGFFYAFFTFATNIQLAILQSENKSYTYSFIQVMSVVLNV
LLGVIAVRYFMASGESRVLSMVIASVVMAFCSIIFIVKSKRVIFFYNVEHIKMAMRFGVPLMPHGLTIFLSNWASLFVLK
MFVDADSVGIYLFAFQLSMVLGVACDAFNRAYVPWLFSHLKVNLFKDKVRIVKVTYVHFVVTLGVAISSFYLGPTFIKFV
FSREYWESAEIVGILVLGQAFGGMYLMVTNYLFFMERTTILSAVTISTNILGLGLCFLLVQDFGLVGAAYAFLFTRVISF
VFVWIASSRIYNMPWFLRTTA

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family. HI_0867/HI_1700 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 47189; Mature: 47058

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure 
SSISIRSLGISSLTYLFSGVLSAVVPFLALPFFTKYLSADEYGLVGLFQGVFTIFLAVV
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GLGVAGSVVKKRGDLNDHEFGVYNFNLLLIWLASGVVIAFLVALLNPYLTGYFVVSSFVI
HCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAGFFYAFFTFATNIQLAILQSENKSYTYSFIQVMSVVLNVLLGVIAVRYFMASGESRVL
HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SMVIASVVMAFCSIIFIVKSKRVIFFYNVEHIKMAMRFGVPLMPHGLTIFLSNWASLFVL
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
KMFVDADSVGIYLFAFQLSMVLGVACDAFNRAYVPWLFSHLKVNLFKDKVRIVKVTYVHF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEHHHHHH
VVTLGVAISSFYLGPTFIKFVFSREYWESAEIVGILVLGQAFGGMYLMVTNYLFFMERTT
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHEEEHHHHCCHHHHHHHHHHHHHHHH
ILSAVTISTNILGLGLCFLLVQDFGLVGAAYAFLFTRVISFVFVWIASSRIYNMPWFLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEE
TA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]