| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is rmlA2 [C]
Identifier: 42523182
GI number: 42523182
Start: 1621680
End: 1622732
Strand: Direct
Name: rmlA2 [C]
Synonym: Bd1685
Alternate gene names: 42523182
Gene position: 1621680-1622732 (Clockwise)
Preceding gene: 42523181
Following gene: 42523183
Centisome position: 42.87
GC content: 40.27
Gene sequence:
>1053_bases ATGATGGTGAATTCTGATTTTTTCGTTTCTTTGGATGATACTTTAAGGCATGCAATGGAAGTTCTCGAGAGAAATTCTAT TCAAATCTGCTTTGTCTTGGATGACAACAAAAAGCTAGTAGGTGCACTTACCGATGGGGATATTCGACGAGCCCTCTTAA AGTGTTCCGATTTGGATCAATTGGTTAAAGGAGTAATGAATAAGAACCCTAAAAGTATATCGGAGGGATTGTCGAGGAAC GAGATTGTTGCGAAAATGCGCCAATGGAGAGTTAGGCATTTACCTGTGTTAAACAGTGCTGGCTGTGTAGTTCGAATCGA AGGTACTGATAGTATTCTTGGTTTGTTAAGGCGAGAAAATAAAGTTGTCCTAATGGCTGGTGGCTTTGGGAAGAGGCTGA GTCCACTAACAGACAGCGTTCCCAAACCACTCTTGAGGGTTGGTGGCCGTCCGATTTTGGAAACAATATTGATGCGTTTC TGTGAATTGGGGTTCTATAATTTTATTTTTGTTGTTAATTATCGTGCGGAGATGATTAAGGAGTATTTTCAAAACGGTGA AAAGTGGGGCGCAACGATAGAGTATTTGCATGAGGAGATACCGCTGGGTACATGTGGAGGCCTATCGTTGCTATCCGAAA AACCGTCATCTCCAATTTTTGTGATGAACGGTGATATTTTAACTAGAGCAAACTTTGCAGAAATGTTGGATTTTCACGCA TCCAGTATGGCCACGGCCACAATGGTCGTTCGAGAGCATATTATTGAAATTCCTTACGGTGTGGTAAAAGTAAATGGTGA TGAAATAGTCTCAATTGAGGAGAAACCGAAAGAAAAAACCTTTGTCAATGCTGGGATTTACATATTATCCCCTGAGGCCC TTGAGTATATTCCTAGAGATCAATTTTATGATATGCCTAGTTTATTTATGTCCCTTAAGGACAAAGAAAAATTGATACAG AGTTTTAAACTTAAAGATTACTGGGTCGACATCGGTAGGCTGGAAGATTTTCATAAAGCTCAGTCTGATTTTGAAGGGTA CTTCGGTGGGTAG
Upstream 100 bases:
>100_bases GGGCTGTCGTTGTTAAAGATGTACCTCCCGATACAATTGTTTTTGGGGTTCCGGCAAGGGAAGTTAAGTCACAAGTGCGG TCGTCACTTTAGGGTTATTT
Downstream 100 bases:
>100_bases CTTAGCTATAATACCAGCACGAGCTGGATCGAGAAGATTGCCAGGGAAGAACAAGAGGAATTTTGCTGGAAAACCTTTGG TTCAATGGACGATAGAAGCG
Product: mannose-1-phosphate guanyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MMVNSDFFVSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQLVKGVMNKNPKSISEGLSRN EIVAKMRQWRVRHLPVLNSAGCVVRIEGTDSILGLLRRENKVVLMAGGFGKRLSPLTDSVPKPLLRVGGRPILETILMRF CELGFYNFIFVVNYRAEMIKEYFQNGEKWGATIEYLHEEIPLGTCGGLSLLSEKPSSPIFVMNGDILTRANFAEMLDFHA SSMATATMVVREHIIEIPYGVVKVNGDEIVSIEEKPKEKTFVNAGIYILSPEALEYIPRDQFYDMPSLFMSLKDKEKLIQ SFKLKDYWVDIGRLEDFHKAQSDFEGYFGG
Sequences:
>Translated_350_residues MMVNSDFFVSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQLVKGVMNKNPKSISEGLSRN EIVAKMRQWRVRHLPVLNSAGCVVRIEGTDSILGLLRRENKVVLMAGGFGKRLSPLTDSVPKPLLRVGGRPILETILMRF CELGFYNFIFVVNYRAEMIKEYFQNGEKWGATIEYLHEEIPLGTCGGLSLLSEKPSSPIFVMNGDILTRANFAEMLDFHA SSMATATMVVREHIIEIPYGVVKVNGDEIVSIEEKPKEKTFVNAGIYILSPEALEYIPRDQFYDMPSLFMSLKDKEKLIQ SFKLKDYWVDIGRLEDFHKAQSDFEGYFGG >Mature_350_residues MMVNSDFFVSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQLVKGVMNKNPKSISEGLSRN EIVAKMRQWRVRHLPVLNSAGCVVRIEGTDSILGLLRRENKVVLMAGGFGKRLSPLTDSVPKPLLRVGGRPILETILMRF CELGFYNFIFVVNYRAEMIKEYFQNGEKWGATIEYLHEEIPLGTCGGLSLLSEKPSSPIFVMNGDILTRANFAEMLDFHA SSMATATMVVREHIIEIPYGVVKVNGDEIVSIEEKPKEKTFVNAGIYILSPEALEYIPRDQFYDMPSLFMSLKDKEKLIQ SFKLKDYWVDIGRLEDFHKAQSDFEGYFGG
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=227, Percent_Identity=33.920704845815, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI11761619, Length=227, Percent_Identity=33.920704845815, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI31881779, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI45447090, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI133931050, Length=233, Percent_Identity=32.618025751073, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6320148, Length=226, Percent_Identity=35.3982300884956, Blast_Score=125, Evalue=9e-30, Organism=Drosophila melanogaster, GI21355443, Length=227, Percent_Identity=34.3612334801762, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644084, Length=227, Percent_Identity=34.3612334801762, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653912, Length=221, Percent_Identity=27.6018099547511, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 39665; Mature: 39665
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVNSDFFVSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQ CEECCCEEEEEHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHCCHHH LVKGVMNKNPKSISEGLSRNEIVAKMRQWRVRHLPVLNSAGCVVRIEGTDSILGLLRREN HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCC KVVLMAGGFGKRLSPLTDSVPKPLLRVGGRPILETILMRFCELGFYNFIFVVNYRAEMIK EEEEEECCCCCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECHHHHHH EYFQNGEKWGATIEYLHEEIPLGTCGGLSLLSEKPSSPIFVMNGDILTRANFAEMLDFHA HHHHCCHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHH SSMATATMVVREHIIEIPYGVVKVNGDEIVSIEEKPKEKTFVNAGIYILSPEALEYIPRD HHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEEECCEEEECCHHHHHCCCH QFYDMPSLFMSLKDKEKLIQSFKLKDYWVDIGRLEDFHKAQSDFEGYFGG HCCCCHHHHHHHHHHHHHHHHHCHHHHHEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMVNSDFFVSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQ CEECCCEEEEEHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHCCHHH LVKGVMNKNPKSISEGLSRNEIVAKMRQWRVRHLPVLNSAGCVVRIEGTDSILGLLRREN HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCC KVVLMAGGFGKRLSPLTDSVPKPLLRVGGRPILETILMRFCELGFYNFIFVVNYRAEMIK EEEEEECCCCCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECHHHHHH EYFQNGEKWGATIEYLHEEIPLGTCGGLSLLSEKPSSPIFVMNGDILTRANFAEMLDFHA HHHHCCHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHH SSMATATMVVREHIIEIPYGVVKVNGDEIVSIEEKPKEKTFVNAGIYILSPEALEYIPRD HHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEEECCEEEECCHHHHHCCCH QFYDMPSLFMSLKDKEKLIQSFKLKDYWVDIGRLEDFHKAQSDFEGYFGG HCCCCHHHHHHHHHHHHHHHHHCHHHHHEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA