Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is cgmA [H]

Identifier: 42523172

GI number: 42523172

Start: 1608636

End: 1610309

Strand: Direct

Name: cgmA [H]

Synonym: Bd1673

Alternate gene names: 42523172

Gene position: 1608636-1610309 (Clockwise)

Preceding gene: 42523171

Following gene: 42523174

Centisome position: 42.52

GC content: 45.82

Gene sequence:

>1674_bases
ATGCGAATCAGATGGCCGGAAAAAAATCAGGTGCTATGGGGTTTGTTGCTGCTAAGTGTGCTTAGCGTACTTCTGCAGGT
ATTTGCCTTTAAGTATCTTCTGATTGTTAAACTCTTGATGCCCTGGCTGCTGTATTTCTCGGTCTTGGTCTTTTTAAGGC
CCTATCCAGCCGCATTTTTCGTTTTCCTGCTTGAATGTCTTGGGGCGCGTATTCATCTGATGAAGTTAGCCTTAACGAAT
TCGCCGTTTGAGGCATCAGATCTTTTTGCTTGGAAGCAGGCCTTCTTTTTAAAAAGCTACGTTGACTATATGGTCCCAGC
GATCATTATAGGGATCCTGATTTCCCTATGGAAAGGACTGTCTTTTAAGAAAAAGCAATTGCTATTCTTGCCGGTCTTTT
TCATGGTTGCGATGTCCTTTGTGCAGGAGCGCCATCCCACAGAGGCTACGGCAAATCCGGTCAGTTCCTTATTTAAGCTT
GCCCGTGTGGTTTATGTGGATTGGAACTTTGCCACCAACGTCAAAGAAAACGGAATTCTGAATCATATTTTTTTAACCAT
GTCGACGGGGCAGGTGCCGACCAAGGGGAAGCTTCCCTACGACAGTCTTAAGACGATGATCGATCCCAAGAAAGTAAAGA
ATCAGCCCGACGTGTTTTTAGTGTTGTGCGAATCCTGTTATACCAGCAGCAACGACAGCTTTGTGACGCCGATTGTGGAT
CTTGAAAAGGACGGTTTTGCACATGCGACTGTCATTTCGCCAGTGTATGGGGGGATGACGGCCGAGGCGGAGTTTGAGGT
CCTGACCGGCCTTCCAAGTCGTCGTTACAAGGGGATCGACTATATGTACTTTGCGGAAAGGTACTCCGAAAAGCCCGATG
CGATTCCTCGTATTTTTGCAGACAATGGTTACGACACCTTTTCGTCACACCCTCTGCCGGGTTTTTTCTGGAAAAGGGAA
ATCGTCCACCCGAAATTTGGATTTAACAGGACTTTTTTCTCTGATTCGATGAATCTGGAAGGGAAAAAAGGCACTTATCC
CGAAGACAAGATTCTTTTTGATCTGGCACTTTCAGAATATAAAGAAAACCTCAAGGCGGGGAAAAAGACTTTTGCATTCC
TTCTGTCCCTTTACACACACGGTCCCTATACAGAAACTGACGGTGATGGTGGTGAGGCCGACTACAAGCAAAGGCTTGCA
ATCACCGTACGTCAGTACTTGGAATTTAAGAACGAAGCGGTAAGATTAGCTCGGGAAAATAACCGCCCAGTGATGTTCGT
GATATTTGGGGACCACAAACCTGCCATGACGATCTCTTTCTATAAACGTCATGAATTCAATGAAGACTTTTTTAGCGCTA
AAGGTGCTAAAAACGAGTCTTTTCAGTTTTCGACCTTGAATCCTGCGCAACAGATCGTGTTCGGCAAGGTGCCATTGTAC
GTGAAAAGCTATGGGTTGGATGATTCAGCGGTGGCGGCGGAAATTACTAAAGCCAACAGCAATCGGCCTTTGTTTTGTCT
GCCGGGCCTTATGTTTGAGCAACTGGGTGTCCACACGGCATATTTCACCTATCTGGTGGACACCTGCCGCAAAGATCCGG
AAGAGTTGGTCGATCCGGATATCTTAAAGAATTACTTTACAGATGAGATTTATGGGGATCGGTTGTTTGATTAG

Upstream 100 bases:

>100_bases
TCCGATGAAGTTTAAGCCTACTGGGGTGGAGCGCTTGCCAAAGTACGTGCAGGAAAATCAGGCAAAGTACTCCAAATTGC
TTTTGTTGTAAGGTTCAACG

Downstream 100 bases:

>100_bases
TGCCCGCGCCGCGAGACAGGTATCCATAGGAAAAGCCCAGGATTATAAGCACGTAATTGCGGGTTTCCTGCTGGATGATC
GGGGTTTCTGTAAAGGAGCA

Product: putative cyclic beta-1,2-glucan modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MRIRWPEKNQVLWGLLLLSVLSVLLQVFAFKYLLIVKLLMPWLLYFSVLVFLRPYPAAFFVFLLECLGARIHLMKLALTN
SPFEASDLFAWKQAFFLKSYVDYMVPAIIIGILISLWKGLSFKKKQLLFLPVFFMVAMSFVQERHPTEATANPVSSLFKL
ARVVYVDWNFATNVKENGILNHIFLTMSTGQVPTKGKLPYDSLKTMIDPKKVKNQPDVFLVLCESCYTSSNDSFVTPIVD
LEKDGFAHATVISPVYGGMTAEAEFEVLTGLPSRRYKGIDYMYFAERYSEKPDAIPRIFADNGYDTFSSHPLPGFFWKRE
IVHPKFGFNRTFFSDSMNLEGKKGTYPEDKILFDLALSEYKENLKAGKKTFAFLLSLYTHGPYTETDGDGGEADYKQRLA
ITVRQYLEFKNEAVRLARENNRPVMFVIFGDHKPAMTISFYKRHEFNEDFFSAKGAKNESFQFSTLNPAQQIVFGKVPLY
VKSYGLDDSAVAAEITKANSNRPLFCLPGLMFEQLGVHTAYFTYLVDTCRKDPEELVDPDILKNYFTDEIYGDRLFD

Sequences:

>Translated_557_residues
MRIRWPEKNQVLWGLLLLSVLSVLLQVFAFKYLLIVKLLMPWLLYFSVLVFLRPYPAAFFVFLLECLGARIHLMKLALTN
SPFEASDLFAWKQAFFLKSYVDYMVPAIIIGILISLWKGLSFKKKQLLFLPVFFMVAMSFVQERHPTEATANPVSSLFKL
ARVVYVDWNFATNVKENGILNHIFLTMSTGQVPTKGKLPYDSLKTMIDPKKVKNQPDVFLVLCESCYTSSNDSFVTPIVD
LEKDGFAHATVISPVYGGMTAEAEFEVLTGLPSRRYKGIDYMYFAERYSEKPDAIPRIFADNGYDTFSSHPLPGFFWKRE
IVHPKFGFNRTFFSDSMNLEGKKGTYPEDKILFDLALSEYKENLKAGKKTFAFLLSLYTHGPYTETDGDGGEADYKQRLA
ITVRQYLEFKNEAVRLARENNRPVMFVIFGDHKPAMTISFYKRHEFNEDFFSAKGAKNESFQFSTLNPAQQIVFGKVPLY
VKSYGLDDSAVAAEITKANSNRPLFCLPGLMFEQLGVHTAYFTYLVDTCRKDPEELVDPDILKNYFTDEIYGDRLFD
>Mature_557_residues
MRIRWPEKNQVLWGLLLLSVLSVLLQVFAFKYLLIVKLLMPWLLYFSVLVFLRPYPAAFFVFLLECLGARIHLMKLALTN
SPFEASDLFAWKQAFFLKSYVDYMVPAIIIGILISLWKGLSFKKKQLLFLPVFFMVAMSFVQERHPTEATANPVSSLFKL
ARVVYVDWNFATNVKENGILNHIFLTMSTGQVPTKGKLPYDSLKTMIDPKKVKNQPDVFLVLCESCYTSSNDSFVTPIVD
LEKDGFAHATVISPVYGGMTAEAEFEVLTGLPSRRYKGIDYMYFAERYSEKPDAIPRIFADNGYDTFSSHPLPGFFWKRE
IVHPKFGFNRTFFSDSMNLEGKKGTYPEDKILFDLALSEYKENLKAGKKTFAFLLSLYTHGPYTETDGDGGEADYKQRLA
ITVRQYLEFKNEAVRLARENNRPVMFVIFGDHKPAMTISFYKRHEFNEDFFSAKGAKNESFQFSTLNPAQQIVFGKVPLY
VKSYGLDDSAVAAEITKANSNRPLFCLPGLMFEQLGVHTAYFTYLVDTCRKDPEELVDPDILKNYFTDEIYGDRLFD

Specific function: Unknown

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 63914; Mature: 63914

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRWPEKNQVLWGLLLLSVLSVLLQVFAFKYLLIVKLLMPWLLYFSVLVFLRPYPAAFF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VFLLECLGARIHLMKLALTNSPFEASDLFAWKQAFFLKSYVDYMVPAIIIGILISLWKGL
HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFKKKQLLFLPVFFMVAMSFVQERHPTEATANPVSSLFKLARVVYVDWNFATNVKENGIL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCE
NHIFLTMSTGQVPTKGKLPYDSLKTMIDPKKVKNQPDVFLVLCESCYTSSNDSFVTPIVD
EEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHCCCCCEEEEEEHHHCCCCCCCEECCEEE
LEKDGFAHATVISPVYGGMTAEAEFEVLTGLPSRRYKGIDYMYFAERYSEKPDAIPRIFA
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHCCCCCHHHHHHHHCCCCCCCCEEEC
DNGYDTFSSHPLPGFFWKREIVHPKFGFNRTFFSDSMNLEGKKGTYPEDKILFDLALSEY
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
KENLKAGKKTFAFLLSLYTHGPYTETDGDGGEADYKQRLAITVRQYLEFKNEAVRLAREN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRPVMFVIFGDHKPAMTISFYKRHEFNEDFFSAKGAKNESFQFSTLNPAQQIVFGKVPLY
CCCEEEEEECCCCCCEEEEEHHHCCCCHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCE
VKSYGLDDSAVAAEITKANSNRPLFCLPGLMFEQLGVHTAYFTYLVDTCRKDPEELVDPD
EEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHH
ILKNYFTDEIYGDRLFD
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIRWPEKNQVLWGLLLLSVLSVLLQVFAFKYLLIVKLLMPWLLYFSVLVFLRPYPAAFF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VFLLECLGARIHLMKLALTNSPFEASDLFAWKQAFFLKSYVDYMVPAIIIGILISLWKGL
HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFKKKQLLFLPVFFMVAMSFVQERHPTEATANPVSSLFKLARVVYVDWNFATNVKENGIL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCE
NHIFLTMSTGQVPTKGKLPYDSLKTMIDPKKVKNQPDVFLVLCESCYTSSNDSFVTPIVD
EEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHCCCCCEEEEEEHHHCCCCCCCEECCEEE
LEKDGFAHATVISPVYGGMTAEAEFEVLTGLPSRRYKGIDYMYFAERYSEKPDAIPRIFA
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHCCCCCHHHHHHHHCCCCCCCCEEEC
DNGYDTFSSHPLPGFFWKREIVHPKFGFNRTFFSDSMNLEGKKGTYPEDKILFDLALSEY
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
KENLKAGKKTFAFLLSLYTHGPYTETDGDGGEADYKQRLAITVRQYLEFKNEAVRLAREN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRPVMFVIFGDHKPAMTISFYKRHEFNEDFFSAKGAKNESFQFSTLNPAQQIVFGKVPLY
CCCEEEEEECCCCCCEEEEEHHHCCCCHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCE
VKSYGLDDSAVAAEITKANSNRPLFCLPGLMFEQLGVHTAYFTYLVDTCRKDPEELVDPD
EEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHH
ILKNYFTDEIYGDRLFD
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10419956; 11481430 [H]