Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is cgmA [H]

Identifier: 42523174

GI number: 42523174

Start: 1611635

End: 1613305

Strand: Direct

Name: cgmA [H]

Synonym: Bd1676

Alternate gene names: 42523174

Gene position: 1611635-1613305 (Clockwise)

Preceding gene: 42523172

Following gene: 42523175

Centisome position: 42.6

GC content: 44.58

Gene sequence:

>1671_bases
ATGCGTTTGAAAGTGCCAAATAGAAATCTAGTCTTATGGGGTTTGTTGCTCCTAAGTCTGCTAAGTATATCGTTGCAAGT
TGCTGTTTTTAAGATCAGCTTGCCCGGCAAACTTTTGATGCCCTGGTTGCTGTATTTCTCTTGTTTGTTGTTTTTAAGGC
CTTTCTCTGCAGCTTTGATGGTGTTTTTCGTCGAGTGTTTTTTTCTGCGAATCCATCTAATGAAGATGGCATTGACGAAC
TCTCCGTTTGAGGCTTCAGACATCTTTGCTTGGAAGCAGGCGTTGTTCCTAAAAAGTTATGCAGACTATGTTCTGCCAGC
GATTGTGATCGGAATTCTGGTAAGTCTATGGAGGGGGTTGTCCTTCTCGAAGAAGCAGCTCTTGTTCTTGCCGGTGTTTT
TTGTTGTTGCGACATCTTTTGTGCAGGAGCGGCAGCCAACTGAAACTCAAGACAGTTTGGTGGGTACCTTGTTTAAGGTG
ACCCGGGTGAACTATGTGGATTGGAGTTTCACCACCAACGTCAAAGAAAATGGCATTTTGAATCATATTTTCCTGACTTT
ACCAACGGGCCAGATCCCGGCCAAAGGCAAGCTTCCATATGACGATGTAAAGTCTTTGGTGGATGTAAAAAGGCCGAAGG
AAGAACCCGATGTGTTCCTGGTGCTTTGCGAATCCTGTTACACCAGCAGTAATGATAGCTTTGTGACCCCGATTGCAGAC
CTTGAAAAAGAGGGCTTTGCTCATTCGACGGTGATTTCTCCGGTGTATGGTGGGATGACGGCCGAGGCCGAGTTCGAGGT
TTTGACGGGTTTGCCAAGCCGTCGCTATAAGGGCATTGATTTTCAGTACTTTGCTGAGCGTTACTCCAAGACAGCCATGG
CGGTTCCTCGAATATTTTCTGAAAATGGTTATGACACATGGTCTGCACACGCCAATGACGGCTTTTTCTGGAAGCGTGAT
ATCGTTCACCCGAAATTCGGATTTCAAAGATCTTTCTTTGCAGAGGATATGAATTTGCCTGAAAAAGGTAAGTATCCAGA
AGATAAAGTGCTTTTTGATCTGGCTCTTGCAAAGTACCAAGAAAGTCTTGAGGCTGGAAAAAAGACTTTTGCTTTTCTTA
TCACTGTTTATACCCACGGACCCTATGCTGACACAGATGGTGACGGTGGCGAGGCGGTTTATAAAGAAAAACTTGATAAA
ACTGTAAAACAGTTTTTAGAGTTCCAGTCTGCGGCCGCAGAGTTGGCGAAGAAAAACAAACGTCCTGTGATGTTTGTGAT
TTTCGGTGATCATAAGCCTGCAATGACGCTGTCTTTTTATCGCCGACATGAGTTTACAGAGGACTATTTCAGCACGACCG
GGTCAAGAAACCAGTCCTTTCTGTTTTCGACTTTGAGTCCCTCGCAGCAGATTGTGTATGGCAAGGTGCCGATGTATGTG
AAGGGGTATGGTCTGAAAGCAGATGGTGTGTCTGAGGCTATTGCTAGAGCGAATGAAGAGCGTCCGATATTCTGTCTGCC
TGGTGTTTTGTCTGAAAAGATAGGAATTCATAATTCATTCTATAGTTATCTGGTAGATGCTTGTCGCAAGAATCCTGAGT
ACCTAGTAGATCCTGAATTCCTCAGAAAATACTTTGCTGAGGGGATTTATGGCGGGCGATTGTTTGATTAG

Upstream 100 bases:

>100_bases
AGAACTCTATTTTTTGGACGCTAATCTGTCACTGAGTTTTTGCGCTCACACGCGTTAATGCTGGTGTGGGGGGAAGAAAT
TTATGTAGGATATCCAACTG

Downstream 100 bases:

>100_bases
TTAGAATATATTAGAAATTTCGGAAGCTATTTGTTGTGTGTTCCAAGCTACCGAGGTTCAGTTTATTTTGAAGAAGTAGT
ATTGGGTGTTGTAAACCTCG

Product: putative phosphoglycerol transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALMVFFVECFFLRIHLMKMALTN
SPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGLSFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKV
TRVNYVDWSFTTNVKENGILNHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD
LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFSENGYDTWSAHANDGFFWKRD
IVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDK
TVKQFLEFQSAAAELAKKNKRPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV
KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEFLRKYFAEGIYGGRLFD

Sequences:

>Translated_556_residues
MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALMVFFVECFFLRIHLMKMALTN
SPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGLSFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKV
TRVNYVDWSFTTNVKENGILNHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD
LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFSENGYDTWSAHANDGFFWKRD
IVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDK
TVKQFLEFQSAAAELAKKNKRPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV
KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEFLRKYFAEGIYGGRLFD
>Mature_556_residues
MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALMVFFVECFFLRIHLMKMALTN
SPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGLSFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKV
TRVNYVDWSFTTNVKENGILNHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD
LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFSENGYDTWSAHANDGFFWKRD
IVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDK
TVKQFLEFQSAAAELAKKNKRPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV
KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEFLRKYFAEGIYGGRLFD

Specific function: Unknown

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 63303; Mature: 63303

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALM
CEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VFFVECFFLRIHLMKMALTNSPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKVTRVNYVDWSFTTNVKENGIL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCE
NHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCHHH
LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFS
HHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
ENGYDTWSAHANDGFFWKRDIVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQ
CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
ESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDKTVKQFLEFQSAAAELAKKNK
HHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV
CCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCEE
KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEF
ECCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCEEECHHH
LRKYFAEGIYGGRLFD
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALM
CEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VFFVECFFLRIHLMKMALTNSPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKVTRVNYVDWSFTTNVKENGIL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCE
NHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCHHH
LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFS
HHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
ENGYDTWSAHANDGFFWKRDIVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQ
CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
ESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDKTVKQFLEFQSAAAELAKKNK
HHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV
CCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCEE
KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEF
ECCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCEEECHHH
LRKYFAEGIYGGRLFD
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10419956; 11481430 [H]