| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is cgmA [H]
Identifier: 42523174
GI number: 42523174
Start: 1611635
End: 1613305
Strand: Direct
Name: cgmA [H]
Synonym: Bd1676
Alternate gene names: 42523174
Gene position: 1611635-1613305 (Clockwise)
Preceding gene: 42523172
Following gene: 42523175
Centisome position: 42.6
GC content: 44.58
Gene sequence:
>1671_bases ATGCGTTTGAAAGTGCCAAATAGAAATCTAGTCTTATGGGGTTTGTTGCTCCTAAGTCTGCTAAGTATATCGTTGCAAGT TGCTGTTTTTAAGATCAGCTTGCCCGGCAAACTTTTGATGCCCTGGTTGCTGTATTTCTCTTGTTTGTTGTTTTTAAGGC CTTTCTCTGCAGCTTTGATGGTGTTTTTCGTCGAGTGTTTTTTTCTGCGAATCCATCTAATGAAGATGGCATTGACGAAC TCTCCGTTTGAGGCTTCAGACATCTTTGCTTGGAAGCAGGCGTTGTTCCTAAAAAGTTATGCAGACTATGTTCTGCCAGC GATTGTGATCGGAATTCTGGTAAGTCTATGGAGGGGGTTGTCCTTCTCGAAGAAGCAGCTCTTGTTCTTGCCGGTGTTTT TTGTTGTTGCGACATCTTTTGTGCAGGAGCGGCAGCCAACTGAAACTCAAGACAGTTTGGTGGGTACCTTGTTTAAGGTG ACCCGGGTGAACTATGTGGATTGGAGTTTCACCACCAACGTCAAAGAAAATGGCATTTTGAATCATATTTTCCTGACTTT ACCAACGGGCCAGATCCCGGCCAAAGGCAAGCTTCCATATGACGATGTAAAGTCTTTGGTGGATGTAAAAAGGCCGAAGG AAGAACCCGATGTGTTCCTGGTGCTTTGCGAATCCTGTTACACCAGCAGTAATGATAGCTTTGTGACCCCGATTGCAGAC CTTGAAAAAGAGGGCTTTGCTCATTCGACGGTGATTTCTCCGGTGTATGGTGGGATGACGGCCGAGGCCGAGTTCGAGGT TTTGACGGGTTTGCCAAGCCGTCGCTATAAGGGCATTGATTTTCAGTACTTTGCTGAGCGTTACTCCAAGACAGCCATGG CGGTTCCTCGAATATTTTCTGAAAATGGTTATGACACATGGTCTGCACACGCCAATGACGGCTTTTTCTGGAAGCGTGAT ATCGTTCACCCGAAATTCGGATTTCAAAGATCTTTCTTTGCAGAGGATATGAATTTGCCTGAAAAAGGTAAGTATCCAGA AGATAAAGTGCTTTTTGATCTGGCTCTTGCAAAGTACCAAGAAAGTCTTGAGGCTGGAAAAAAGACTTTTGCTTTTCTTA TCACTGTTTATACCCACGGACCCTATGCTGACACAGATGGTGACGGTGGCGAGGCGGTTTATAAAGAAAAACTTGATAAA ACTGTAAAACAGTTTTTAGAGTTCCAGTCTGCGGCCGCAGAGTTGGCGAAGAAAAACAAACGTCCTGTGATGTTTGTGAT TTTCGGTGATCATAAGCCTGCAATGACGCTGTCTTTTTATCGCCGACATGAGTTTACAGAGGACTATTTCAGCACGACCG GGTCAAGAAACCAGTCCTTTCTGTTTTCGACTTTGAGTCCCTCGCAGCAGATTGTGTATGGCAAGGTGCCGATGTATGTG AAGGGGTATGGTCTGAAAGCAGATGGTGTGTCTGAGGCTATTGCTAGAGCGAATGAAGAGCGTCCGATATTCTGTCTGCC TGGTGTTTTGTCTGAAAAGATAGGAATTCATAATTCATTCTATAGTTATCTGGTAGATGCTTGTCGCAAGAATCCTGAGT ACCTAGTAGATCCTGAATTCCTCAGAAAATACTTTGCTGAGGGGATTTATGGCGGGCGATTGTTTGATTAG
Upstream 100 bases:
>100_bases AGAACTCTATTTTTTGGACGCTAATCTGTCACTGAGTTTTTGCGCTCACACGCGTTAATGCTGGTGTGGGGGGAAGAAAT TTATGTAGGATATCCAACTG
Downstream 100 bases:
>100_bases TTAGAATATATTAGAAATTTCGGAAGCTATTTGTTGTGTGTTCCAAGCTACCGAGGTTCAGTTTATTTTGAAGAAGTAGT ATTGGGTGTTGTAAACCTCG
Product: putative phosphoglycerol transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALMVFFVECFFLRIHLMKMALTN SPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGLSFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKV TRVNYVDWSFTTNVKENGILNHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFSENGYDTWSAHANDGFFWKRD IVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDK TVKQFLEFQSAAAELAKKNKRPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEFLRKYFAEGIYGGRLFD
Sequences:
>Translated_556_residues MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALMVFFVECFFLRIHLMKMALTN SPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGLSFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKV TRVNYVDWSFTTNVKENGILNHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFSENGYDTWSAHANDGFFWKRD IVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDK TVKQFLEFQSAAAELAKKNKRPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEFLRKYFAEGIYGGRLFD >Mature_556_residues MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALMVFFVECFFLRIHLMKMALTN SPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGLSFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKV TRVNYVDWSFTTNVKENGILNHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFSENGYDTWSAHANDGFFWKRD IVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDK TVKQFLEFQSAAAELAKKNKRPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEFLRKYFAEGIYGGRLFD
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 63303; Mature: 63303
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALM CEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VFFVECFFLRIHLMKMALTNSPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKVTRVNYVDWSFTTNVKENGIL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCE NHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD EEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCHHH LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFS HHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC ENGYDTWSAHANDGFFWKRDIVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQ CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDKTVKQFLEFQSAAAELAKKNK HHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV CCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCEE KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEF ECCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCEEECHHH LRKYFAEGIYGGRLFD HHHHHHCCCCCCCCCC >Mature Secondary Structure MRLKVPNRNLVLWGLLLLSLLSISLQVAVFKISLPGKLLMPWLLYFSCLLFLRPFSAALM CEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VFFVECFFLRIHLMKMALTNSPFEASDIFAWKQALFLKSYADYVLPAIVIGILVSLWRGL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFSKKQLLFLPVFFVVATSFVQERQPTETQDSLVGTLFKVTRVNYVDWSFTTNVKENGIL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCE NHIFLTLPTGQIPAKGKLPYDDVKSLVDVKRPKEEPDVFLVLCESCYTSSNDSFVTPIAD EEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCEECCHHH LEKEGFAHSTVISPVYGGMTAEAEFEVLTGLPSRRYKGIDFQYFAERYSKTAMAVPRIFS HHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC ENGYDTWSAHANDGFFWKRDIVHPKFGFQRSFFAEDMNLPEKGKYPEDKVLFDLALAKYQ CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ESLEAGKKTFAFLITVYTHGPYADTDGDGGEAVYKEKLDKTVKQFLEFQSAAAELAKKNK HHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPVMFVIFGDHKPAMTLSFYRRHEFTEDYFSTTGSRNQSFLFSTLSPSQQIVYGKVPMYV CCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCEE KGYGLKADGVSEAIARANEERPIFCLPGVLSEKIGIHNSFYSYLVDACRKNPEYLVDPEF ECCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHCCCCEEECHHH LRKYFAEGIYGGRLFD HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10419956; 11481430 [H]