| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523114
Identifier: 42523114
GI number: 42523114
Start: 1542809
End: 1543333
Strand: Direct
Name: 42523114
Synonym: Bd1610
Alternate gene names: NA
Gene position: 1542809-1543333 (Clockwise)
Preceding gene: 42523113
Following gene: 42523115
Centisome position: 40.78
GC content: 48.95
Gene sequence:
>525_bases ATGGCGGCTAAATATACAAAAGGTATTGCTGGTATCTGGTTGGAAGAGGCTCAAATTCTGAAAGCGACCCGCAAAGTGCG TGAGTCCGGTTTCACGAAGTTTGAAGCGATCTCTGCTTATCCTATTCACGGAATGGAAGAAGCAGCGGGTATCAAACGCT CCTGGATTCCTTACGTGGCATTCACTATGGGTCTGGCTGGTTTGGCTGGTGGTCTTGCATTGACTTACTGGACATCTGCT GTGAACTGGGCGGTGAACGTGGGTGGTAAGCCGTTCTTCAGCTTGCCTGCGTTTGTACCTATCATGTTCGAATTGACGAT TTTGTTGTCGGCGCTTTCTTCAGTAGGGGCTTTGTTCTATGCCTGCGGTATCCCGCGCATGGATCCACCGGTGATCGATC CGGATCTAAGCTGCCACAAGTTCGCTATCTTTATCCCGCACAATGACAACGGTTACGACGAAGCTAAAATTGAATCTATG TTCAAAGAGCTTGGCGCAACTGAAGTGAAGAAGACGGAGTACTAG
Upstream 100 bases:
>100_bases CGCTGTTCTTGTTGTATTTGCGTCTGTTCCCTGCGGTTTCTATCGCGGAAGTGAAGCCCGTATTGCATGTGGGTTACGAT GATAAAGGAGGGCACCACTA
Downstream 100 bases:
>100_bases TAAGATGAGAAACATCGTGAATATTTCAATGGGTGTTGCAGCAGCGGGATTGGCTGTTCTGGCGTTGTCCAGCTGCGGTC CTCGTGGCAACAAGCCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: QuinolCytochrome C Oxidoreductase Membrane Protein; ABC-Type Fe3+ Transport System Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVAFTMGLAGLAGGLALTYWTSA VNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFYACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESM FKELGATEVKKTEY
Sequences:
>Translated_174_residues MAAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVAFTMGLAGLAGGLALTYWTSA VNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFYACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESM FKELGATEVKKTEY >Mature_173_residues AAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVAFTMGLAGLAGGLALTYWTSAV NWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFYACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESMF KELGATEVKKTEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19033; Mature: 18902
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHEECCCCCCCHHHHCCCHHHHHHHH FTMGLAGLAGGLALTYWTSAVNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFY HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESMFKELGATEVKKTEY HCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure AAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHEECCCCCCCHHHHCCCHHHHHHHH FTMGLAGLAGGLALTYWTSAVNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFY HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESMFKELGATEVKKTEY HCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA