Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523113

Identifier: 42523113

GI number: 42523113

Start: 1541448

End: 1542809

Strand: Direct

Name: 42523113

Synonym: Bd1609

Alternate gene names: NA

Gene position: 1541448-1542809 (Clockwise)

Preceding gene: 42523112

Following gene: 42523114

Centisome position: 40.75

GC content: 50.73

Gene sequence:

>1362_bases
ATGATGAAGCGTAGCCCATTAGTCCTTGGCAATAAAACTTTGAAAGATGTTACTGACGACATCTGCGCTCCGGTGGAACG
CTTCCCATCCAAAGGTTGGGTGGGGATGTTCCTGGGTGCGAAGACGTTGCTTCTGTTCTATATCGGTATCCTGGCATCCG
TGGTGGGTGTGGGTATCGGTCTTCTGGGTGTGAACAGCCCGGTGTTCTGGGGTACGATGATCGTTACATTCGTATTCTGG
ATCGGTATCGGTCACGCCGGTACTCTGATTTCCGCGGTTCTGTTCCTGTTCCGTCAAAAGTGGAGAACTTCCGTAGCTCG
TACCGCAGAGGCGATGACCGTCTTCGCGGTTATGACCGCGGGTCTGTTCCCGCTGTTGCACACCGGTCGTCCTTGGTTGG
ATTACTGGTTGTTCCCGTACCCGAATCAACGTGGTCCATTGTGGGTGAACTTCCGTTCTCCGCTTCTTTGGGACGTTTTC
GCGGTATCCACTTACGCGACAGTTTCCATGGTGTTCTGGTACATCGGTTTGGTTCCTGACTTTGCAACTATCAAAGACCG
TGCGAAAAACAAACTTCGCCGTACCGTTTACGGTGCGTTGTCTTTGGGTTGGAGAGGTACTGCGAAGAACTGGTCTCACT
ACGAAATGGTTTACTTGCTTCTGGCAGGTCTTTCCACTCCGCTGGTTTTGTCCGTTCACACGATCGTATCCTTCGACTTC
GCGGTTTCTAACTTGCCAGGTTGGCACACCACGATCTTCCCTCCATACTTCGTTGCCGGTGCGATCTTCTCCGGTTTCGC
GATGGTTGTGACTCTGATGACTTTGGTTCGTATTGGATTCCCTGAGTTCAAGAACTACGTCACTTTGGATCATATGGAAG
TGATGAATAAGATCATCATGACCACAGGTATGCTGGTTGGTTACGCTTATGCGTCTGAGTTCTTCATTGCATGGTACTCT
GGCAACCAATACGAGCGCTTCGTGTTCATCAACCGTGCGTTCGGTCCTTACGGCTGGTCTTACTGGATCATGGTGTCTTG
TAATACCATCTTCCCTCAGTTGTTCTGGTTCCGCAGATTCCGTCGTTCCATACCGGTGATGTTCGTAGTGTCCATCCTGG
TGAACATCGGTATGTGGTTCGAGCGTTTCGTGATCACTGTGACTTCTTTGCACAGAGACTTCCTGCCTTCTTCCTGGGGC
ATGTATGCTTGGTCTTGGTTCGATACCGGGGTTCTGGTTGGATCCTTCGGTATGTTCCTGACGCTGTTCTTGTTGTATTT
GCGTCTGTTCCCTGCGGTTTCTATCGCGGAAGTGAAGCCCGTATTGCATGTGGGTTACGATGATAAAGGAGGGCACCACT
AA

Upstream 100 bases:

>100_bases
CGGCTCCGTCCGTTCGCTATCTTTCCAAGATCCGTAACAATGATAAAGAATCAACTGGTGATCAAAAAGGTCACGGTACT
GCAAAACAAGGTGAGCACTC

Downstream 100 bases:

>100_bases
TGGCGGCTAAATATACAAAAGGTATTGCTGGTATCTGGTTGGAAGAGGCTCAAATTCTGAAAGCGACCCGCAAAGTGCGT
GAGTCCGGTTTCACGAAGTT

Product: molybdopterin oxidoreductase

Products: NA

Alternate protein names: Molybdopterin Oxidoredutase Membrane Subunit; Molybdopterin Oxidoreductase Membrane Subunit; Molybdopterin Oxidoreductase; NrfD Family Oxidoreductase Membrane Subunit; Polysulphide Reductase; Polysulphide Reductase NrfD Superfamily; Polysulphide Reductase Nrfd; Oxidoredutase Membrane Subunit Nrfd Family; Anaerobic Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIGLLGVNSPVFWGTMIVTFVFW
IGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTAGLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVF
AVSTYATVSMVFWYIGLVPDFATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF
AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIMTTGMLVGYAYASEFFIAWYS
GNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRFRRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWG
MYAWSWFDTGVLVGSFGMFLTLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH

Sequences:

>Translated_453_residues
MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIGLLGVNSPVFWGTMIVTFVFW
IGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTAGLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVF
AVSTYATVSMVFWYIGLVPDFATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF
AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIMTTGMLVGYAYASEFFIAWYS
GNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRFRRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWG
MYAWSWFDTGVLVGSFGMFLTLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH
>Mature_453_residues
MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIGLLGVNSPVFWGTMIVTFVFW
IGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTAGLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVF
AVSTYATVSMVFWYIGLVPDFATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF
AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIMTTGMLVGYAYASEFFIAWYS
GNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRFRRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWG
MYAWSWFDTGVLVGSFGMFLTLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH

Specific function: Unknown

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51618; Mature: 51618

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCHHHCCCEEEECCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCHHHCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA