| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523113
Identifier: 42523113
GI number: 42523113
Start: 1541448
End: 1542809
Strand: Direct
Name: 42523113
Synonym: Bd1609
Alternate gene names: NA
Gene position: 1541448-1542809 (Clockwise)
Preceding gene: 42523112
Following gene: 42523114
Centisome position: 40.75
GC content: 50.73
Gene sequence:
>1362_bases ATGATGAAGCGTAGCCCATTAGTCCTTGGCAATAAAACTTTGAAAGATGTTACTGACGACATCTGCGCTCCGGTGGAACG CTTCCCATCCAAAGGTTGGGTGGGGATGTTCCTGGGTGCGAAGACGTTGCTTCTGTTCTATATCGGTATCCTGGCATCCG TGGTGGGTGTGGGTATCGGTCTTCTGGGTGTGAACAGCCCGGTGTTCTGGGGTACGATGATCGTTACATTCGTATTCTGG ATCGGTATCGGTCACGCCGGTACTCTGATTTCCGCGGTTCTGTTCCTGTTCCGTCAAAAGTGGAGAACTTCCGTAGCTCG TACCGCAGAGGCGATGACCGTCTTCGCGGTTATGACCGCGGGTCTGTTCCCGCTGTTGCACACCGGTCGTCCTTGGTTGG ATTACTGGTTGTTCCCGTACCCGAATCAACGTGGTCCATTGTGGGTGAACTTCCGTTCTCCGCTTCTTTGGGACGTTTTC GCGGTATCCACTTACGCGACAGTTTCCATGGTGTTCTGGTACATCGGTTTGGTTCCTGACTTTGCAACTATCAAAGACCG TGCGAAAAACAAACTTCGCCGTACCGTTTACGGTGCGTTGTCTTTGGGTTGGAGAGGTACTGCGAAGAACTGGTCTCACT ACGAAATGGTTTACTTGCTTCTGGCAGGTCTTTCCACTCCGCTGGTTTTGTCCGTTCACACGATCGTATCCTTCGACTTC GCGGTTTCTAACTTGCCAGGTTGGCACACCACGATCTTCCCTCCATACTTCGTTGCCGGTGCGATCTTCTCCGGTTTCGC GATGGTTGTGACTCTGATGACTTTGGTTCGTATTGGATTCCCTGAGTTCAAGAACTACGTCACTTTGGATCATATGGAAG TGATGAATAAGATCATCATGACCACAGGTATGCTGGTTGGTTACGCTTATGCGTCTGAGTTCTTCATTGCATGGTACTCT GGCAACCAATACGAGCGCTTCGTGTTCATCAACCGTGCGTTCGGTCCTTACGGCTGGTCTTACTGGATCATGGTGTCTTG TAATACCATCTTCCCTCAGTTGTTCTGGTTCCGCAGATTCCGTCGTTCCATACCGGTGATGTTCGTAGTGTCCATCCTGG TGAACATCGGTATGTGGTTCGAGCGTTTCGTGATCACTGTGACTTCTTTGCACAGAGACTTCCTGCCTTCTTCCTGGGGC ATGTATGCTTGGTCTTGGTTCGATACCGGGGTTCTGGTTGGATCCTTCGGTATGTTCCTGACGCTGTTCTTGTTGTATTT GCGTCTGTTCCCTGCGGTTTCTATCGCGGAAGTGAAGCCCGTATTGCATGTGGGTTACGATGATAAAGGAGGGCACCACT AA
Upstream 100 bases:
>100_bases CGGCTCCGTCCGTTCGCTATCTTTCCAAGATCCGTAACAATGATAAAGAATCAACTGGTGATCAAAAAGGTCACGGTACT GCAAAACAAGGTGAGCACTC
Downstream 100 bases:
>100_bases TGGCGGCTAAATATACAAAAGGTATTGCTGGTATCTGGTTGGAAGAGGCTCAAATTCTGAAAGCGACCCGCAAAGTGCGT GAGTCCGGTTTCACGAAGTT
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: Molybdopterin Oxidoredutase Membrane Subunit; Molybdopterin Oxidoreductase Membrane Subunit; Molybdopterin Oxidoreductase; NrfD Family Oxidoreductase Membrane Subunit; Polysulphide Reductase; Polysulphide Reductase NrfD Superfamily; Polysulphide Reductase Nrfd; Oxidoredutase Membrane Subunit Nrfd Family; Anaerobic Dehydrogenase Membrane Anchor Subunit
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIGLLGVNSPVFWGTMIVTFVFW IGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTAGLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVF AVSTYATVSMVFWYIGLVPDFATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIMTTGMLVGYAYASEFFIAWYS GNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRFRRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWG MYAWSWFDTGVLVGSFGMFLTLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH
Sequences:
>Translated_453_residues MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIGLLGVNSPVFWGTMIVTFVFW IGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTAGLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVF AVSTYATVSMVFWYIGLVPDFATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIMTTGMLVGYAYASEFFIAWYS GNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRFRRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWG MYAWSWFDTGVLVGSFGMFLTLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH >Mature_453_residues MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIGLLGVNSPVFWGTMIVTFVFW IGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTAGLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVF AVSTYATVSMVFWYIGLVPDFATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIMTTGMLVGYAYASEFFIAWYS GNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRFRRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWG MYAWSWFDTGVLVGSFGMFLTLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH
Specific function: Unknown
COG id: COG5557
COG function: function code C; Polysulphide reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51618; Mature: 51618
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIG CCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLGVNSPVFWGTMIVTFVFWIGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTA HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVFAVSTYATVSMVFWYIGLVPD HHHHHHHCCCHHHHEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC FATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIM HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEHHHHHHHHHHHH TTGMLVGYAYASEFFIAWYSGNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRF HHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHH RRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWGMYAWSWFDTGVLVGSFGMFL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH TLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH HHHHHHHHHCCCCCHHHCCCEEEECCCCCCCCC >Mature Secondary Structure MMKRSPLVLGNKTLKDVTDDICAPVERFPSKGWVGMFLGAKTLLLFYIGILASVVGVGIG CCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLGVNSPVFWGTMIVTFVFWIGIGHAGTLISAVLFLFRQKWRTSVARTAEAMTVFAVMTA HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFPLLHTGRPWLDYWLFPYPNQRGPLWVNFRSPLLWDVFAVSTYATVSMVFWYIGLVPD HHHHHHHCCCHHHHEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC FATIKDRAKNKLRRTVYGALSLGWRGTAKNWSHYEMVYLLLAGLSTPLVLSVHTIVSFDF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH AVSNLPGWHTTIFPPYFVAGAIFSGFAMVVTLMTLVRIGFPEFKNYVTLDHMEVMNKIIM HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEHHHHHHHHHHHH TTGMLVGYAYASEFFIAWYSGNQYERFVFINRAFGPYGWSYWIMVSCNTIFPQLFWFRRF HHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHH RRSIPVMFVVSILVNIGMWFERFVITVTSLHRDFLPSSWGMYAWSWFDTGVLVGSFGMFL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH TLFLLYLRLFPAVSIAEVKPVLHVGYDDKGGHH HHHHHHHHHCCCCCHHHCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA