Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523114

Identifier: 42523114

GI number: 42523114

Start: 1542809

End: 1543333

Strand: Direct

Name: 42523114

Synonym: Bd1610

Alternate gene names: NA

Gene position: 1542809-1543333 (Clockwise)

Preceding gene: 42523113

Following gene: 42523115

Centisome position: 40.78

GC content: 48.95

Gene sequence:

>525_bases
ATGGCGGCTAAATATACAAAAGGTATTGCTGGTATCTGGTTGGAAGAGGCTCAAATTCTGAAAGCGACCCGCAAAGTGCG
TGAGTCCGGTTTCACGAAGTTTGAAGCGATCTCTGCTTATCCTATTCACGGAATGGAAGAAGCAGCGGGTATCAAACGCT
CCTGGATTCCTTACGTGGCATTCACTATGGGTCTGGCTGGTTTGGCTGGTGGTCTTGCATTGACTTACTGGACATCTGCT
GTGAACTGGGCGGTGAACGTGGGTGGTAAGCCGTTCTTCAGCTTGCCTGCGTTTGTACCTATCATGTTCGAATTGACGAT
TTTGTTGTCGGCGCTTTCTTCAGTAGGGGCTTTGTTCTATGCCTGCGGTATCCCGCGCATGGATCCACCGGTGATCGATC
CGGATCTAAGCTGCCACAAGTTCGCTATCTTTATCCCGCACAATGACAACGGTTACGACGAAGCTAAAATTGAATCTATG
TTCAAAGAGCTTGGCGCAACTGAAGTGAAGAAGACGGAGTACTAG

Upstream 100 bases:

>100_bases
CGCTGTTCTTGTTGTATTTGCGTCTGTTCCCTGCGGTTTCTATCGCGGAAGTGAAGCCCGTATTGCATGTGGGTTACGAT
GATAAAGGAGGGCACCACTA

Downstream 100 bases:

>100_bases
TAAGATGAGAAACATCGTGAATATTTCAATGGGTGTTGCAGCAGCGGGATTGGCTGTTCTGGCGTTGTCCAGCTGCGGTC
CTCGTGGCAACAAGCCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: QuinolCytochrome C Oxidoreductase Membrane Protein; ABC-Type Fe3+ Transport System Protein

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVAFTMGLAGLAGGLALTYWTSA
VNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFYACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESM
FKELGATEVKKTEY

Sequences:

>Translated_174_residues
MAAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVAFTMGLAGLAGGLALTYWTSA
VNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFYACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESM
FKELGATEVKKTEY
>Mature_173_residues
AAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVAFTMGLAGLAGGLALTYWTSAV
NWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFYACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESMF
KELGATEVKKTEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19033; Mature: 18902

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHEECCCCCCCHHHHCCCHHHHHHHH
FTMGLAGLAGGLALTYWTSAVNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFY
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESMFKELGATEVKKTEY
HCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
AAKYTKGIAGIWLEEAQILKATRKVRESGFTKFEAISAYPIHGMEEAAGIKRSWIPYVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHEECCCCCCCHHHHCCCHHHHHHHH
FTMGLAGLAGGLALTYWTSAVNWAVNVGGKPFFSLPAFVPIMFELTILLSALSSVGALFY
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ACGIPRMDPPVIDPDLSCHKFAIFIPHNDNGYDEAKIESMFKELGATEVKKTEY
HCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA