Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523104

Identifier: 42523104

GI number: 42523104

Start: 1529473

End: 1530231

Strand: Direct

Name: 42523104

Synonym: Bd1599

Alternate gene names: NA

Gene position: 1529473-1530231 (Clockwise)

Preceding gene: 42523099

Following gene: 42523108

Centisome position: 40.43

GC content: 48.88

Gene sequence:

>759_bases
TTGCGTGAAGTCACGGTTGTACAATCCTTTGTAATTAACCAGCATTACTGCTGTCAGCTCCTAGTCCTTGGGCCTCTTGA
TAGCCTATCAAAAAGGCGAGGTGACTGCACTAAAAAATACATACTGGACCCTGGTCTGGGTCCAGCATTTTTCTGCACAC
ATTTCGTAAAGATAGGTCATGATAGGGATATGAGAATTCTCTACTTCACGGATGGAGCAGGAATCGATCTCTTGGGTATT
CGCGAGTCTTTACTGCGGATCCCGGAGGTGCTCACCTCTCTACGTCGAGGCCAGGAACAGGCACGATACGTAGACCTGAT
GCAGGTGATGGCATTGCCGGACGAAGATTTTCGTCTGGTCCCTTCTGTATTGAGAAACTACCTGATCAATTTGGTTCAAC
GGGGACTGCATCAGCGCTGGATTAATCGTGATCACCGTGCGGATTTGATCCTTCGTCGCATCAATCACCGTAACTTTGCT
GAAATCAAAGCGGAAGTTTTGAACTTCATCCACGGCAAGTTGGAAGGCCGCCCTGTGGCGACCAAGGATCTGCACTTGTT
GCACTTCTTAAGTTCAATTGAGATCACTATCATCGGCCCCGGCTACGACGAAATTGAAATGTGGCTGAGACGCGAAATCT
CCACCCGCAGCGATGTGAAAGTGCTGATTAAAGACGTGATCGCATCGGATCCACAACTTGACTGGTTCTGGCCGCATGTC
ACAGAATCAGTGCTGCCGACAGAAGGCATTGCCAACTAA

Upstream 100 bases:

>100_bases
GCGATAGGCGAGAATGCCCAGATCGGCCACGCAGTAACCAATAAATGCAAAGAGAATATAGGGATACCACTTTTCAAGTG
GTGGTCTTTGATTCTTCGAG

Downstream 100 bases:

>100_bases
AAAAAAGCCCGGTTGCACCGGGCTTTTTTTATTTCTGAGCACACATACCATCAAATGAGTTCGTGCCCTTTGGGTAGGGC
TTGCAGACACGGGCGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MREVTVVQSFVINQHYCCQLLVLGPLDSLSKRRGDCTKKYILDPGLGPAFFCTHFVKIGHDRDMRILYFTDGAGIDLLGI
RESLLRIPEVLTSLRRGQEQARYVDLMQVMALPDEDFRLVPSVLRNYLINLVQRGLHQRWINRDHRADLILRRINHRNFA
EIKAEVLNFIHGKLEGRPVATKDLHLLHFLSSIEITIIGPGYDEIEMWLRREISTRSDVKVLIKDVIASDPQLDWFWPHV
TESVLPTEGIAN

Sequences:

>Translated_252_residues
MREVTVVQSFVINQHYCCQLLVLGPLDSLSKRRGDCTKKYILDPGLGPAFFCTHFVKIGHDRDMRILYFTDGAGIDLLGI
RESLLRIPEVLTSLRRGQEQARYVDLMQVMALPDEDFRLVPSVLRNYLINLVQRGLHQRWINRDHRADLILRRINHRNFA
EIKAEVLNFIHGKLEGRPVATKDLHLLHFLSSIEITIIGPGYDEIEMWLRREISTRSDVKVLIKDVIASDPQLDWFWPHV
TESVLPTEGIAN
>Mature_252_residues
MREVTVVQSFVINQHYCCQLLVLGPLDSLSKRRGDCTKKYILDPGLGPAFFCTHFVKIGHDRDMRILYFTDGAGIDLLGI
RESLLRIPEVLTSLRRGQEQARYVDLMQVMALPDEDFRLVPSVLRNYLINLVQRGLHQRWINRDHRADLILRRINHRNFA
EIKAEVLNFIHGKLEGRPVATKDLHLLHFLSSIEITIIGPGYDEIEMWLRREISTRSDVKVLIKDVIASDPQLDWFWPHV
TESVLPTEGIAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29143; Mature: 29143

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVTVVQSFVINQHYCCQLLVLGPLDSLSKRRGDCTKKYILDPGLGPAFFCTHFVKIGH
CCCHHHHHHHHHCCHHHHHEEEECCHHHHHHHCCCCCHHHEECCCCCHHHHHHHHHHCCC
DRDMRILYFTDGAGIDLLGIRESLLRIPEVLTSLRRGQEQARYVDLMQVMALPDEDFRLV
CCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
PSVLRNYLINLVQRGLHQRWINRDHRADLILRRINHRNFAEIKAEVLNFIHGKLEGRPVA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
TKDLHLLHFLSSIEITIIGPGYDEIEMWLRREISTRSDVKVLIKDVIASDPQLDWFWPHV
HHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHH
TESVLPTEGIAN
HHHHCCCCCCCC
>Mature Secondary Structure
MREVTVVQSFVINQHYCCQLLVLGPLDSLSKRRGDCTKKYILDPGLGPAFFCTHFVKIGH
CCCHHHHHHHHHCCHHHHHEEEECCHHHHHHHCCCCCHHHEECCCCCHHHHHHHHHHCCC
DRDMRILYFTDGAGIDLLGIRESLLRIPEVLTSLRRGQEQARYVDLMQVMALPDEDFRLV
CCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
PSVLRNYLINLVQRGLHQRWINRDHRADLILRRINHRNFAEIKAEVLNFIHGKLEGRPVA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
TKDLHLLHFLSSIEITIIGPGYDEIEMWLRREISTRSDVKVLIKDVIASDPQLDWFWPHV
HHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHH
TESVLPTEGIAN
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA