Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523108

Identifier: 42523108

GI number: 42523108

Start: 1533585

End: 1534442

Strand: Direct

Name: 42523108

Synonym: Bd1603

Alternate gene names: NA

Gene position: 1533585-1534442 (Clockwise)

Preceding gene: 42523104

Following gene: 42523109

Centisome position: 40.54

GC content: 50.23

Gene sequence:

>858_bases
GTGTCACGGTTAAGGTCTATCAGGTCAAGAAGTGAGAGTGATATGGTTAATGCAAATGAAGTACCCTTGATTGTGACGAT
CCCCCATTCCGGTGAAAAAGTTCCGGATCAAACGCCGTGGTTGAAGTCTTTGCCCGAGGAAGTTTTGATGTGCGACGTGG
ATCGTTTTGTCGACTTTCTGTATGAACCGACTTTGCACAAGCTGCACATTCCCTATGTGAAAACCGAATGGCATCGTTAT
GCGGCCGACTTGAACCGGGTGCCTGAAGACGTGGACGCAACGTCCGTTATCGGCAACAGCAACCCGGCCGGCATGCACAA
CCGTGGCTTTCACTGGGTGATCACGACTTACAAACATCAGCTGATGAAAGAACCAATGTCGGTGGATGCGCACAACGAAC
TGGTGAAGCTGGTTTATGAGCCCTTCCATGCCGGCGTTCGCAAGCTGTATGCGGACCTGCATGAAAAAGGTTTCAAGAAA
ACTTATCACATTGATGCCCACAGCATGCCCTCTTTGGGGACCAGCGAGCACCGCGATCCGGGCGAATTGAGAGCCGATAT
CGTTGTCAGCGACAGCAAAGGCAAAAGCTGTGACCCGCGCTTTAAAGATCTGGTGATTGCGGCCTATGCCTCTGCCGGAT
TCAAAGTCGGTTACAACTGGCCGTATTTTGGCGGGCGCGTCACGGAGCAATACGGTGATCCTAAACGCGAGCAACATACA
CTTCAGGTGGAGCTGAACCGCTCATTGTATATGGATGAAAAGACCAAAAAGCTCAAACCTGAAGAAGCGAAAAAGGTTCA
AGAGAAGCTGTTGTTCGCCGTCAGTTATGTCCGCAACAATTTGCTGCATATAATGTAG

Upstream 100 bases:

>100_bases
CAGGAGCCGTCCACAAGGCGGGTGCTGCCTTTGTCGCCAGTGCGCGTATAAATTTTGGCTTTGGGAGCATTCGTCATAGA
TTTGACCCTTCTTGTATTTA

Downstream 100 bases:

>100_bases
GGCGTCGTAAAGGCAAAAAGCGTGGTCATAAAAGCCGATCTAAACTATTGATAGCTATACCAAAATTAATAAGCTCTCAA
TAAGGATCGGCTTTGGATAA

Product: putative formiminoglutamase

Products: NA

Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; Hydrolase; N-Formylglutamate Deformylase; Formiminoglutamase; N-Formylglutamate Amidohydrolase Superfamily; N-Formylglutamate Amidohydrolase Family; Formylglutamate Amidohydrolase; Amidohydrolase; N-Formylglutamate Amidohydrolase Protein

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSRLRSIRSRSESDMVNANEVPLIVTIPHSGEKVPDQTPWLKSLPEEVLMCDVDRFVDFLYEPTLHKLHIPYVKTEWHRY
AADLNRVPEDVDATSVIGNSNPAGMHNRGFHWVITTYKHQLMKEPMSVDAHNELVKLVYEPFHAGVRKLYADLHEKGFKK
TYHIDAHSMPSLGTSEHRDPGELRADIVVSDSKGKSCDPRFKDLVIAAYASAGFKVGYNWPYFGGRVTEQYGDPKREQHT
LQVELNRSLYMDEKTKKLKPEEAKKVQEKLLFAVSYVRNNLLHIM

Sequences:

>Translated_285_residues
MSRLRSIRSRSESDMVNANEVPLIVTIPHSGEKVPDQTPWLKSLPEEVLMCDVDRFVDFLYEPTLHKLHIPYVKTEWHRY
AADLNRVPEDVDATSVIGNSNPAGMHNRGFHWVITTYKHQLMKEPMSVDAHNELVKLVYEPFHAGVRKLYADLHEKGFKK
TYHIDAHSMPSLGTSEHRDPGELRADIVVSDSKGKSCDPRFKDLVIAAYASAGFKVGYNWPYFGGRVTEQYGDPKREQHT
LQVELNRSLYMDEKTKKLKPEEAKKVQEKLLFAVSYVRNNLLHIM
>Mature_284_residues
SRLRSIRSRSESDMVNANEVPLIVTIPHSGEKVPDQTPWLKSLPEEVLMCDVDRFVDFLYEPTLHKLHIPYVKTEWHRYA
ADLNRVPEDVDATSVIGNSNPAGMHNRGFHWVITTYKHQLMKEPMSVDAHNELVKLVYEPFHAGVRKLYADLHEKGFKKT
YHIDAHSMPSLGTSEHRDPGELRADIVVSDSKGKSCDPRFKDLVIAAYASAGFKVGYNWPYFGGRVTEQYGDPKREQHTL
QVELNRSLYMDEKTKKLKPEEAKKVQEKLLFAVSYVRNNLLHIM

Specific function: Unknown

COG id: COG3741

COG function: function code E; N-formylglutamate amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32801; Mature: 32670

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLRSIRSRSESDMVNANEVPLIVTIPHSGEKVPDQTPWLKSLPEEVLMCDVDRFVDFL
CCHHHHHHHCCHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH
YEPTLHKLHIPYVKTEWHRYAADLNRVPEDVDATSVIGNSNPAGMHNRGFHWVITTYKHQ
HCCCHHEEECCEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEHHHHHH
LMKEPMSVDAHNELVKLVYEPFHAGVRKLYADLHEKGFKKTYHIDAHSMPSLGTSEHRDP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
GELRADIVVSDSKGKSCDPRFKDLVIAAYASAGFKVGYNWPYFGGRVTEQYGDPKREQHT
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEEEHHCCCCCCCCEE
LQVELNRSLYMDEKTKKLKPEEAKKVQEKLLFAVSYVRNNLLHIM
EEEEECCCEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SRLRSIRSRSESDMVNANEVPLIVTIPHSGEKVPDQTPWLKSLPEEVLMCDVDRFVDFL
CHHHHHHHCCHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH
YEPTLHKLHIPYVKTEWHRYAADLNRVPEDVDATSVIGNSNPAGMHNRGFHWVITTYKHQ
HCCCHHEEECCEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEHHHHHH
LMKEPMSVDAHNELVKLVYEPFHAGVRKLYADLHEKGFKKTYHIDAHSMPSLGTSEHRDP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
GELRADIVVSDSKGKSCDPRFKDLVIAAYASAGFKVGYNWPYFGGRVTEQYGDPKREQHT
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEEEHHCCCCCCCCEE
LQVELNRSLYMDEKTKKLKPEEAKKVQEKLLFAVSYVRNNLLHIM
EEEEECCCEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA