Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523091

Identifier: 42523091

GI number: 42523091

Start: 1516284

End: 1517519

Strand: Direct

Name: 42523091

Synonym: Bd1586

Alternate gene names: NA

Gene position: 1516284-1517519 (Clockwise)

Preceding gene: 42523076

Following gene: 42523097

Centisome position: 40.08

GC content: 47.49

Gene sequence:

>1236_bases
ATGCGTTCTTTTGGCGTTTTTGTGTTGGTCTGTCTGGTTTCGCTTAATTCACATGCTTTGTTTGGGATTGGGAAGAAGAA
GAAAGCTACTCCTGTTTCAGAGTATTCAAAAGGACATACGATTAAAACAACTGACGGGTGCAGCTTGAATTTGTCAGATC
TTTATATCAACCCTAAAAACAAACATTCTTGGAGCGGAGCCTGCCCTGGCGGTTATGCGGAGGGGATTGGCTGGGTATCT
GTTCAAGCGAATGGAATTTCATATAAAGCCTTTGCAGTTCAAATGCAGCGTGGATGGGTTCTGCCGGGGAGCTACTGGTA
TATTTCCGGTCAAACAGATTTCTACCAAAGCACACTTGGGGCTCATGATTGTAAAGATAGAAAGAGCAATATGCAGCAAT
GTGCTCGGATTGAGTCGTTCGTGGCTGCGAACCCTCCTTATGAGCAAATTCTGACTTCTGATGGGTGTAAACTTCAGCAA
CCTAGCTTGCTGGTCCATGGATCGCAGGTGACCTGGAGTGGGAAGTGTGAGAATGGCTTGGCCGAAGGGTATGGATATGT
AAGGCACCCTTCTAGGGATGGGAACAATGTCATTATTGGAAAATCAGCCTATTTGTTGCGTTATCATCAAGGCAAGAGAG
TTGTCGGCAGTTACTATCAGTGGGACTCTGAGCTCAATGGATCCAAAAACTCGTTCATCTTCAAGATTGATCACGTTCTA
ACTCCTATGCATATTGAAACATTAAAGCCCTGCGCGTCCATCAAGCCTTGTAAAGAGTTGATGGCGGCGAAGGCTTTGGG
TGGGAAGAATCCTGAAGGAATGGCTCCGGTGTCGGACTTCATGCCTCCCGTTACTAATACTCGTGGGGGTGGGGATCGTC
CTCCGACATTTGATCCCAATCCTCGTCCGAATCCGGGTGTTCCGGCGCAGCCTCCGGTGAATGGTGGGAATGGTTCTTCT
GCTGGTGGCGGATATGGTAGCGGCAAGTACAAAGCTCCGAAAGTGGCTTGTGATGACTATGCTTTGGGTCTAGAAATGGA
CAAACACTCTGCAACTATTAATGAGGGCGTTGGGATCTGTGACAATGCCAAGGCGACGGCAAAACTTTATGAGTTCTATG
CCAACTTGCTAGAGGCGAGTTGCCCGTACAAAACTGCTGAAGTGGCACAGGTGCGTGAGGCTGTCGAATCTGCCAAACAA
ACAATTCGTGGCAGTTGCACAGACTATAATTACTAA

Upstream 100 bases:

>100_bases
TAGACGGTCCTTGGAAATTTTGCTGGTTTCTTCGATGTAATCATACAGAAACGTATTTAGTGATAGAAACGCGGATCAAA
TTCAATTTTTTGAGGTTTTC

Downstream 100 bases:

>100_bases
TTAAGAAAATCTTAGGTTCTAAAAACTAAAAACCCCGGTACATCGCCGGGGTTTCTTTTTTTATCTTTCGTTCCAGTACA
CAACTCGTGGGGGGCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MRSFGVFVLVCLVSLNSHALFGIGKKKKATPVSEYSKGHTIKTTDGCSLNLSDLYINPKNKHSWSGACPGGYAEGIGWVS
VQANGISYKAFAVQMQRGWVLPGSYWYISGQTDFYQSTLGAHDCKDRKSNMQQCARIESFVAANPPYEQILTSDGCKLQQ
PSLLVHGSQVTWSGKCENGLAEGYGYVRHPSRDGNNVIIGKSAYLLRYHQGKRVVGSYYQWDSELNGSKNSFIFKIDHVL
TPMHIETLKPCASIKPCKELMAAKALGGKNPEGMAPVSDFMPPVTNTRGGGDRPPTFDPNPRPNPGVPAQPPVNGGNGSS
AGGGYGSGKYKAPKVACDDYALGLEMDKHSATINEGVGICDNAKATAKLYEFYANLLEASCPYKTAEVAQVREAVESAKQ
TIRGSCTDYNY

Sequences:

>Translated_411_residues
MRSFGVFVLVCLVSLNSHALFGIGKKKKATPVSEYSKGHTIKTTDGCSLNLSDLYINPKNKHSWSGACPGGYAEGIGWVS
VQANGISYKAFAVQMQRGWVLPGSYWYISGQTDFYQSTLGAHDCKDRKSNMQQCARIESFVAANPPYEQILTSDGCKLQQ
PSLLVHGSQVTWSGKCENGLAEGYGYVRHPSRDGNNVIIGKSAYLLRYHQGKRVVGSYYQWDSELNGSKNSFIFKIDHVL
TPMHIETLKPCASIKPCKELMAAKALGGKNPEGMAPVSDFMPPVTNTRGGGDRPPTFDPNPRPNPGVPAQPPVNGGNGSS
AGGGYGSGKYKAPKVACDDYALGLEMDKHSATINEGVGICDNAKATAKLYEFYANLLEASCPYKTAEVAQVREAVESAKQ
TIRGSCTDYNY
>Mature_411_residues
MRSFGVFVLVCLVSLNSHALFGIGKKKKATPVSEYSKGHTIKTTDGCSLNLSDLYINPKNKHSWSGACPGGYAEGIGWVS
VQANGISYKAFAVQMQRGWVLPGSYWYISGQTDFYQSTLGAHDCKDRKSNMQQCARIESFVAANPPYEQILTSDGCKLQQ
PSLLVHGSQVTWSGKCENGLAEGYGYVRHPSRDGNNVIIGKSAYLLRYHQGKRVVGSYYQWDSELNGSKNSFIFKIDHVL
TPMHIETLKPCASIKPCKELMAAKALGGKNPEGMAPVSDFMPPVTNTRGGGDRPPTFDPNPRPNPGVPAQPPVNGGNGSS
AGGGYGSGKYKAPKVACDDYALGLEMDKHSATINEGVGICDNAKATAKLYEFYANLLEASCPYKTAEVAQVREAVESAKQ
TIRGSCTDYNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44443; Mature: 44443

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00092 N6_MTASE ; PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFGVFVLVCLVSLNSHALFGIGKKKKATPVSEYSKGHTIKTTDGCSLNLSDLYINPKN
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCEEEECCCCEEEEHEEEECCCC
KHSWSGACPGGYAEGIGWVSVQANGISYKAFAVQMQRGWVLPGSYWYISGQTDFYQSTLG
CCCCCCCCCCCHHCCCEEEEEEECCEEEEEEEEEEECCEECCCCEEEECCCCHHHHHHCC
AHDCKDRKSNMQQCARIESFVAANPPYEQILTSDGCKLQQPSLLVHGSQVTWSGKCENGL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCCH
AEGYGYVRHPSRDGNNVIIGKSAYLLRYHQGKRVVGSYYQWDSELNGSKNSFIFKIDHVL
HHCCCEEECCCCCCCEEEEECCEEEEEEECCCCEECHHHHCCCCCCCCCCCEEEEECCCC
TPMHIETLKPCASIKPCKELMAAKALGGKNPEGMAPVSDFMPPVTNTRGGGDRPPTFDPN
CCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PRPNPGVPAQPPVNGGNGSSAGGGYGSGKYKAPKVACDDYALGLEMDKHSATINEGVGIC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECEEECCCCCHHHCCCCCC
DNAKATAKLYEFYANLLEASCPYKTAEVAQVREAVESAKQTIRGSCTDYNY
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSFGVFVLVCLVSLNSHALFGIGKKKKATPVSEYSKGHTIKTTDGCSLNLSDLYINPKN
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCEEEECCCCEEEEHEEEECCCC
KHSWSGACPGGYAEGIGWVSVQANGISYKAFAVQMQRGWVLPGSYWYISGQTDFYQSTLG
CCCCCCCCCCCHHCCCEEEEEEECCEEEEEEEEEEECCEECCCCEEEECCCCHHHHHHCC
AHDCKDRKSNMQQCARIESFVAANPPYEQILTSDGCKLQQPSLLVHGSQVTWSGKCENGL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCCH
AEGYGYVRHPSRDGNNVIIGKSAYLLRYHQGKRVVGSYYQWDSELNGSKNSFIFKIDHVL
HHCCCEEECCCCCCCEEEEECCEEEEEEECCCCEECHHHHCCCCCCCCCCCEEEEECCCC
TPMHIETLKPCASIKPCKELMAAKALGGKNPEGMAPVSDFMPPVTNTRGGGDRPPTFDPN
CCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PRPNPGVPAQPPVNGGNGSSAGGGYGSGKYKAPKVACDDYALGLEMDKHSATINEGVGIC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECEEECCCCCHHHCCCCCC
DNAKATAKLYEFYANLLEASCPYKTAEVAQVREAVESAKQTIRGSCTDYNY
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA