| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is mutL [H]
Identifier: 42523070
GI number: 42523070
Start: 1489758
End: 1491638
Strand: Direct
Name: mutL [H]
Synonym: Bd1564
Alternate gene names: 42523070
Gene position: 1489758-1491638 (Clockwise)
Preceding gene: 42523069
Following gene: 42523071
Centisome position: 39.38
GC content: 53.43
Gene sequence:
>1881_bases ATGCAAATTCCCCCTATGTCGATCCAGATTTTATCCCCTGAAGTTGTTGACCAAATCGCCGCGGGCGAGGTGGTGGAGCG TCCTGCTCATCTCGTCAAAGAACTTGTGGAAAACAGCATCGATGCCGGCGCCACCCGCGTGCACGTGGAATTCTACGACG GCGGCCGCATCGTCAAGGTGATCGACAACGGCAAGGGGATGTCCCCGGAAGATTTGCCCAAATCCCTGGAACGATTCGCA ACCAGCAAAATCTCAAAAACCGATGACCTGTGGTCTTTGCGCACTTTCGGTTTCCGCGGCGAAGCTTTGGCCAGTATCGC CTCTGTCAGCAAGCTGACACTGACTTCGCGTCGTGCCGGGGATGAACAGGCCCATCAGCTGATCAGTGAATACGGAAAAA GAAAAGAGATCGACAAAGTCGGCGGCTCGCAAGGCACGACCATCCTGATTGAAAACCTTTTCGACAACACTCCGGCGCGT TTGAAATTCCTGAAGTCTGATTCGGCTGAAAACTCGGCGATCAAGACGACCTTGAAGGCGATGGCCTTGTCTCATTACGA TGTCGAGTTCCGCATTCAGGAAAACGGCAAGCTTGTGGCGTTCTGGCCGGCGTGTAAATCCCGCAAGGACCGTGTTGAAC AAATTCTTGAAATCAAACCTCTGTTCGAAGGCGAAGCTTCCCGCGAAAACGTGAAGGCCTATGCGGTGTTTGCCGATCCT CATAACGTCGCCAAGACTTCAAAAAATATCTGGCTGTTTGCGCAAAATCGCTGGATCCAGGATCGCAGTCTGCAGGCGGC CGTGAACGAAGCCTATCGCAGTCTTCTGATGCACGGAGAATATCCGATTGCCGCCGTGTGGGTGGAAGTGGATCCGGACT GTGTGGATGTGAACATTCACCCGACAAAATCCCAGGTGAAATTCCAGGATCCGTCCCTGGCATTCCGTGCTGTGGCGGCG GCTTTGCGTGGCACGCTGGAGCAGGCACCCTGGATCAAACGCTCGGATGTGGCAACGCAGAATGTGACCATGCCGCTTAC GCAGAACTCTTCTGAGGAGTTTAAATCCACTGACGGGCTTCCGAACTTTGCTTCGCAACCCATGCCTCAGCAGAATCTGC GCTTCCAGGACAATTCTTTGGAAGTGACTCAGTTCCAGAAAAAAGAATTCAGCTTCCCGGCGTCCAGTTTTCCGGTCTCA TCATTGCAGCAGCCGCAGACCACTTATCAGGCCCTGGCTGAGTCGGCGGCTCAGCGTGAATCCTTTGCTCCGAAAGCGGA GGAGGCTTCACTGGGTTACTGGTCTTCTTTGGAGGTTCTGGGGCAGGCGAATTTGACTTACATCGTGACTCAGTCCAGAG ACAAGCTGGTGTTCGTGGATCAGCACGCCGCTCACGAGCGTGTGGTGTTTGAAAAACTGATGAATGCCTGGAAGGGTGGG AAGGTTGATATTCAAGACTTCCTGTTCCCCCTGGCGATTGATATGTCTCCGGAAAAAGTCGAAGGTCTTTTGACCATGGC CAAAGAAATGGAACGCCTGGGTGTTTTCATTGAAGCTTTGGGTCCGGGCACGGTTGGTGTTAAAGCCGCCCCGTTGATGA TCAAAGAATCCAGCCTCAGCGGTGTTTTGGACAAGATGGCGACCGAGATCGTGGATCAGGGCGGCAGTTATTCTTTGGAA AGAACTGTGGGCGACATTTGTGCCACGATGGCGTGCCATTCCGTGGTGCGGGCAGGGCAGTCTTTAAGTCCGGATCAGAT GCGCAGTCTGCTTCGTGACATGGACATGTTCCCGCTTTCAAGCTTCTGTCCTCACGGTCGCCCGGTCAGTGTGGAGTACC CGTACTACAAGCTGGAAAAAGATTTCGGACGAATAGTTTAA
Upstream 100 bases:
>100_bases CTTGACCGAGGTCAAACAACTGCGCTCCAAACTGCTGAAATGTCAGGCTTGGGGCGAGTGTCTGCGCCCACAATAGTCCT TTGACTTGAGGGGGGAGCTC
Downstream 100 bases:
>100_bases TGGCGAAAAGGCATGTGATTTTTGTTGTCGGCTCCACGGCCACCGGGAAATCCGAGTGGGCGCTGAAGCTTGCGCAAGAA TTCAACGGCGTCATCGTCAA
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MQIPPMSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYDGGRIVKVIDNGKGMSPEDLPKSLERFA TSKISKTDDLWSLRTFGFRGEALASIASVSKLTLTSRRAGDEQAHQLISEYGKRKEIDKVGGSQGTTILIENLFDNTPAR LKFLKSDSAENSAIKTTLKAMALSHYDVEFRIQENGKLVAFWPACKSRKDRVEQILEIKPLFEGEASRENVKAYAVFADP HNVAKTSKNIWLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVNIHPTKSQVKFQDPSLAFRAVAA ALRGTLEQAPWIKRSDVATQNVTMPLTQNSSEEFKSTDGLPNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVS SLQQPQTTYQALAESAAQRESFAPKAEEASLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWKGG KVDIQDFLFPLAIDMSPEKVEGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESSLSGVLDKMATEIVDQGGSYSLE RTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFPLSSFCPHGRPVSVEYPYYKLEKDFGRIV
Sequences:
>Translated_626_residues MQIPPMSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYDGGRIVKVIDNGKGMSPEDLPKSLERFA TSKISKTDDLWSLRTFGFRGEALASIASVSKLTLTSRRAGDEQAHQLISEYGKRKEIDKVGGSQGTTILIENLFDNTPAR LKFLKSDSAENSAIKTTLKAMALSHYDVEFRIQENGKLVAFWPACKSRKDRVEQILEIKPLFEGEASRENVKAYAVFADP HNVAKTSKNIWLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVNIHPTKSQVKFQDPSLAFRAVAA ALRGTLEQAPWIKRSDVATQNVTMPLTQNSSEEFKSTDGLPNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVS SLQQPQTTYQALAESAAQRESFAPKAEEASLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWKGG KVDIQDFLFPLAIDMSPEKVEGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESSLSGVLDKMATEIVDQGGSYSLE RTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFPLSSFCPHGRPVSVEYPYYKLEKDFGRIV >Mature_626_residues MQIPPMSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYDGGRIVKVIDNGKGMSPEDLPKSLERFA TSKISKTDDLWSLRTFGFRGEALASIASVSKLTLTSRRAGDEQAHQLISEYGKRKEIDKVGGSQGTTILIENLFDNTPAR LKFLKSDSAENSAIKTTLKAMALSHYDVEFRIQENGKLVAFWPACKSRKDRVEQILEIKPLFEGEASRENVKAYAVFADP HNVAKTSKNIWLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVNIHPTKSQVKFQDPSLAFRAVAA ALRGTLEQAPWIKRSDVATQNVTMPLTQNSSEEFKSTDGLPNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVS SLQQPQTTYQALAESAAQRESFAPKAEEASLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWKGG KVDIQDFLFPLAIDMSPEKVEGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESSLSGVLDKMATEIVDQGGSYSLE RTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFPLSSFCPHGRPVSVEYPYYKLEKDFGRIV
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=313, Percent_Identity=34.5047923322684, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI4505913, Length=373, Percent_Identity=27.8820375335121, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI310128478, Length=373, Percent_Identity=27.8820375335121, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI189458896, Length=398, Percent_Identity=25.3768844221106, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI189458898, Length=464, Percent_Identity=24.1379310344828, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4505911, Length=415, Percent_Identity=25.0602409638554, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI91992160, Length=358, Percent_Identity=27.3743016759777, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI91992162, Length=358, Percent_Identity=27.3743016759777, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI263191589, Length=219, Percent_Identity=29.2237442922374, Blast_Score=87, Evalue=7e-17, Organism=Escherichia coli, GI1790612, Length=342, Percent_Identity=38.3040935672515, Blast_Score=215, Evalue=7e-57, Organism=Caenorhabditis elegans, GI71991825, Length=390, Percent_Identity=32.5641025641026, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17562796, Length=357, Percent_Identity=24.0896358543417, Blast_Score=105, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6323819, Length=333, Percent_Identity=34.8348348348348, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=362, Percent_Identity=25.414364640884, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6325093, Length=208, Percent_Identity=28.3653846153846, Blast_Score=74, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323063, Length=168, Percent_Identity=30.952380952381, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI17136968, Length=314, Percent_Identity=34.3949044585987, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI17136970, Length=179, Percent_Identity=36.8715083798883, Blast_Score=103, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 69523; Mature: 69523
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPPMSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYDGGRIVKV CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEE IDNGKGMSPEDLPKSLERFATSKISKTDDLWSLRTFGFRGEALASIASVSKLTLTSRRAG EECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC DEQAHQLISEYGKRKEIDKVGGSQGTTILIENLFDNTPARLKFLKSDSAENSAIKTTLKA HHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECHHCCCCHHEEEEECCCCCCHHHHHHHHH MALSHYDVEFRIQENGKLVAFWPACKSRKDRVEQILEIKPLFEGEASRENVKAYAVFADP HHHHCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC HNVAKTSKNIWLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVNIH HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEC PTKSQVKFQDPSLAFRAVAAALRGTLEQAPWIKRSDVATQNVTMPLTQNSSEEFKSTDGL CCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCC PNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVSSLQQPQTTYQALAESAAQRE CCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH SFAPKAEEASLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWKGG HCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCC KVDIQDFLFPLAIDMSPEKVEGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESSLS CEEHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEECCEEEECCHHH GVLDKMATEIVDQGGSYSLERTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFPLS HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH SFCPHGRPVSVEYPYYKLEKDFGRIV HHCCCCCEEEEECCHHHHHHHHCCCC >Mature Secondary Structure MQIPPMSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYDGGRIVKV CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEE IDNGKGMSPEDLPKSLERFATSKISKTDDLWSLRTFGFRGEALASIASVSKLTLTSRRAG EECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC DEQAHQLISEYGKRKEIDKVGGSQGTTILIENLFDNTPARLKFLKSDSAENSAIKTTLKA HHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECHHCCCCHHEEEEECCCCCCHHHHHHHHH MALSHYDVEFRIQENGKLVAFWPACKSRKDRVEQILEIKPLFEGEASRENVKAYAVFADP HHHHCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC HNVAKTSKNIWLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVNIH HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEC PTKSQVKFQDPSLAFRAVAAALRGTLEQAPWIKRSDVATQNVTMPLTQNSSEEFKSTDGL CCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCC PNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVSSLQQPQTTYQALAESAAQRE CCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH SFAPKAEEASLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWKGG HCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCC KVDIQDFLFPLAIDMSPEKVEGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESSLS CEEHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEECCEEEECCHHH GVLDKMATEIVDQGGSYSLERTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFPLS HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH SFCPHGRPVSVEYPYYKLEKDFGRIV HHCCCCCEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA