| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523069
Identifier: 42523069
GI number: 42523069
Start: 1489158
End: 1489733
Strand: Direct
Name: 42523069
Synonym: Bd1563
Alternate gene names: NA
Gene position: 1489158-1489733 (Clockwise)
Preceding gene: 42523068
Following gene: 42523070
Centisome position: 39.36
GC content: 48.26
Gene sequence:
>576_bases GTGCGTTTGGCTGCATTGTTTTTTGTCATTCTTTTTAGTTCTGTTTCTTTTGCGGGTGGGGACATTGAGCCTTACTTCGA GGCTTTGAAAAATTCCGGTGCTAATTTTGAACCTGACGGCACTGTTTGTGAGGAAATTGCCCGTCTTGAAGTCACCAAAG AATTTGGTGATGCTTATGAAGTGACCACCGGGGTGGAATACAGCCTGGGGGAAGACACTTTAGGAGAGCTTGATGTGGTG GTGTTTGAGAAATCCACGCATAAAGTCGTTCTGGTGGCCGAGGTGAAGTGCTGGAAGAATCTGCAGCAGGCCATGGATAA GCTGAAAGCTCAGCGTGACCGTTTTACATGGAATTTGACCAAACACGCCAATCACATTCAGTTTCAGCCGGATACAGGTC TGAACTTCCGTGTGGAGGACTTCCAGGGGCCGTTTAAATTCCGCGCTATTTCTCAGTTTGGCGGTCTTAAAAAGGGCTTT GATCAAGAGATCCAACTGACCTTGACCGAGGTCAAACAACTGCGCTCCAAACTGCTGAAATGTCAGGCTTGGGGCGAGTG TCTGCGCCCACAATAG
Upstream 100 bases:
>100_bases ATCTGGGCTGGGATTTTTAACGCGCAGCTTCGGAAAAAGTAAGCTGGTACCTTTTGTGGAAGCGAGGTGTTATGAAGGCG CTTCTTAGAGGGGGCTCTTT
Downstream 100 bases:
>100_bases TCCTTTGACTTGAGGGGGGAGCTCATGCAAATTCCCCCTATGTCGATCCAGATTTTATCCCCTGAAGTTGTTGACCAAAT CGCCGCGGGCGAGGTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRLAALFFVILFSSVSFAGGDIEPYFEALKNSGANFEPDGTVCEEIARLEVTKEFGDAYEVTTGVEYSLGEDTLGELDVV VFEKSTHKVVLVAEVKCWKNLQQAMDKLKAQRDRFTWNLTKHANHIQFQPDTGLNFRVEDFQGPFKFRAISQFGGLKKGF DQEIQLTLTEVKQLRSKLLKCQAWGECLRPQ
Sequences:
>Translated_191_residues MRLAALFFVILFSSVSFAGGDIEPYFEALKNSGANFEPDGTVCEEIARLEVTKEFGDAYEVTTGVEYSLGEDTLGELDVV VFEKSTHKVVLVAEVKCWKNLQQAMDKLKAQRDRFTWNLTKHANHIQFQPDTGLNFRVEDFQGPFKFRAISQFGGLKKGF DQEIQLTLTEVKQLRSKLLKCQAWGECLRPQ >Mature_191_residues MRLAALFFVILFSSVSFAGGDIEPYFEALKNSGANFEPDGTVCEEIARLEVTKEFGDAYEVTTGVEYSLGEDTLGELDVV VFEKSTHKVVLVAEVKCWKNLQQAMDKLKAQRDRFTWNLTKHANHIQFQPDTGLNFRVEDFQGPFKFRAISQFGGLKKGF DQEIQLTLTEVKQLRSKLLKCQAWGECLRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21694; Mature: 21694
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAALFFVILFSSVSFAGGDIEPYFEALKNSGANFEPDGTVCEEIARLEVTKEFGDAYE CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE VTTGVEYSLGEDTLGELDVVVFEKSTHKVVLVAEVKCWKNLQQAMDKLKAQRDRFTWNLT ECCCCEECCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEC KHANHIQFQPDTGLNFRVEDFQGPFKFRAISQFGGLKKGFDQEIQLTLTEVKQLRSKLLK CCCCEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH CQAWGECLRPQ HHHHHHHCCCC >Mature Secondary Structure MRLAALFFVILFSSVSFAGGDIEPYFEALKNSGANFEPDGTVCEEIARLEVTKEFGDAYE CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE VTTGVEYSLGEDTLGELDVVVFEKSTHKVVLVAEVKCWKNLQQAMDKLKAQRDRFTWNLT ECCCCEECCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEC KHANHIQFQPDTGLNFRVEDFQGPFKFRAISQFGGLKKGFDQEIQLTLTEVKQLRSKLLK CCCCEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH CQAWGECLRPQ HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA