Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523046

Identifier: 42523046

GI number: 42523046

Start: 1462792

End: 1464009

Strand: Direct

Name: 42523046

Synonym: Bd1539

Alternate gene names: NA

Gene position: 1462792-1464009 (Clockwise)

Preceding gene: 42523045

Following gene: 42523047

Centisome position: 38.67

GC content: 55.58

Gene sequence:

>1218_bases
ATGAAAAACGTGTTTAAAAAACTGATCCCTTTGGCTGCGGCTGTGACTTTTGCTGACCCTGCATGGGCCCGGATTCTGGG
GGATCCCTCAGAAAGAACCCGCGTGCTGCTTGAAGAACAACAATTTCTTTGCAGTCAGAATGAAACTCTTGTGATTAACG
GCGACGTGGAAATCACGCGCAAGAACGAGGACCTGCGCAATGCACCTCTGAATGTTGATTTGATCTGCAAACGGATTGAA
TTCAAAAACGGGGGGAGAATTCTGACGCAATCCAATTTGCAGATTGTAGCTGACTCTGTTGAAGGCTTTATGAATGTGGA
AAGCATTCGCGGGGTGAAAGGACAGCAGGGTGAATTCGCCTCTGCGGTACTGGAAATTGCCAACACCGGTTCTGCCGGAG
CCCGCGGTGGCAATGGCAGGGGCGGCAGCCTGACAGATTCTCCAGAGGACGGAGGCCGAGGCCAGCATGGCTACAATGGT
ATGGATGGCCGGGACGGCAACAATGGCGCTCCGGGTGAACCTGGGGTTCATGCTTCTGACATCGTTGTGAAAATCAACAG
AATCCAAGGGACGGTTGGCTTCCGCATCCGCGCAGTTGGGGGCGAAGGCGGCACGGGCGGTAAGGGTGGCAGAGGGCAAC
AAGGTGGTAACGGGGGCGTCGGTGGGGACGGCGGTCGTGGTGGGAACCAAAAGTACGCTATTTGGAATCGCTCTGGCGAT
GGCGGAGACGGTGGTGATGGAGGACACGGCGGCAACGGCGGTAATGGCGGCGCTGGTGGTGACGGAGGACGAGGTGGCAA
CGGCGGTAAGATCGCTTTGTATGTGGCCGAGGTCTTCAACACGCTGGAACTGACCGGGGATGAGTTCGACAACCGCGGAG
GCCCCGGAGGTCAGCCAGGTATGGGCGGCGAAGGTGGTGTTGGTGGCAAAGGGGGCGAAGGTGGTAAGGGCGGATCTTCT
GGGACGGCTCTGGTGACCTCAAGTTGTGATGTCCCTCCGTGTGAAGGTGATAACGGTCGCCATGGTAAAAAAGGTCTTGA
TGGCAAGCCGGGACTGGCCGGTCCGCAAGGGCGTCTGGGGCAGGACGGTTTGGCCGGTGTTAAAATTCTGGATCCGAAAT
TTAAATTTGTGAAGTCGGTTCCTGACGACTATTTCGACAAGCTGCCCGAGCTGGGAACAGAAAAGAATTTGAAAATACTC
AGAATGAAACTTCCTTAA

Upstream 100 bases:

>100_bases
CCGGTGTAGAGGGCCGCGAGGGCCTTGTGACCAAAGCGGAGATTTATATTTCCAATGATGTCTCCATTGAGAGCTTTCAA
TTTTAGTAAGGAGAATGACC

Downstream 100 bases:

>100_bases
GAGCAGGGACAAAGTTATGAAAAAAATTATTTTGGCAATGTTGTTGTTATCGTTGCAGACGTATGCGCAGACAATCAGTT
ACAGCGAAAACAGTTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKNVFKKLIPLAAAVTFADPAWARILGDPSERTRVLLEEQQFLCSQNETLVINGDVEITRKNEDLRNAPLNVDLICKRIE
FKNGGRILTQSNLQIVADSVEGFMNVESIRGVKGQQGEFASAVLEIANTGSAGARGGNGRGGSLTDSPEDGGRGQHGYNG
MDGRDGNNGAPGEPGVHASDIVVKINRIQGTVGFRIRAVGGEGGTGGKGGRGQQGGNGGVGGDGGRGGNQKYAIWNRSGD
GGDGGDGGHGGNGGNGGAGGDGGRGGNGGKIALYVAEVFNTLELTGDEFDNRGGPGGQPGMGGEGGVGGKGGEGGKGGSS
GTALVTSSCDVPPCEGDNGRHGKKGLDGKPGLAGPQGRLGQDGLAGVKILDPKFKFVKSVPDDYFDKLPELGTEKNLKIL
RMKLP

Sequences:

>Translated_405_residues
MKNVFKKLIPLAAAVTFADPAWARILGDPSERTRVLLEEQQFLCSQNETLVINGDVEITRKNEDLRNAPLNVDLICKRIE
FKNGGRILTQSNLQIVADSVEGFMNVESIRGVKGQQGEFASAVLEIANTGSAGARGGNGRGGSLTDSPEDGGRGQHGYNG
MDGRDGNNGAPGEPGVHASDIVVKINRIQGTVGFRIRAVGGEGGTGGKGGRGQQGGNGGVGGDGGRGGNQKYAIWNRSGD
GGDGGDGGHGGNGGNGGAGGDGGRGGNGGKIALYVAEVFNTLELTGDEFDNRGGPGGQPGMGGEGGVGGKGGEGGKGGSS
GTALVTSSCDVPPCEGDNGRHGKKGLDGKPGLAGPQGRLGQDGLAGVKILDPKFKFVKSVPDDYFDKLPELGTEKNLKIL
RMKLP
>Mature_405_residues
MKNVFKKLIPLAAAVTFADPAWARILGDPSERTRVLLEEQQFLCSQNETLVINGDVEITRKNEDLRNAPLNVDLICKRIE
FKNGGRILTQSNLQIVADSVEGFMNVESIRGVKGQQGEFASAVLEIANTGSAGARGGNGRGGSLTDSPEDGGRGQHGYNG
MDGRDGNNGAPGEPGVHASDIVVKINRIQGTVGFRIRAVGGEGGTGGKGGRGQQGGNGGVGGDGGRGGNQKYAIWNRSGD
GGDGGDGGHGGNGGNGGAGGDGGRGGNGGKIALYVAEVFNTLELTGDEFDNRGGPGGQPGMGGEGGVGGKGGEGGKGGSS
GTALVTSSCDVPPCEGDNGRHGKKGLDGKPGLAGPQGRLGQDGLAGVKILDPKFKFVKSVPDDYFDKLPELGTEKNLKIL
RMKLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41072; Mature: 41072

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVFKKLIPLAAAVTFADPAWARILGDPSERTRVLLEEQQFLCSQNETLVINGDVEITR
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEE
KNEDLRNAPLNVDLICKRIEFKNGGRILTQSNLQIVADSVEGFMNVESIRGVKGQQGEFA
CCCCHHCCCCCHHEEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCHHH
SAVLEIANTGSAGARGGNGRGGSLTDSPEDGGRGQHGYNGMDGRDGNNGAPGEPGVHASD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
IVVKINRIQGTVGFRIRAVGGEGGTGGKGGRGQQGGNGGVGGDGGRGGNQKYAIWNRSGD
EEEEEEEEECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
GGDGGDGGHGGNGGNGGAGGDGGRGGNGGKIALYVAEVFNTLELTGDEFDNRGGPGGQPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCCCCCCCC
MGGEGGVGGKGGEGGKGGSSGTALVTSSCDVPPCEGDNGRHGKKGLDGKPGLAGPQGRLG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QDGLAGVKILDPKFKFVKSVPDDYFDKLPELGTEKNLKILRMKLP
CCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKNVFKKLIPLAAAVTFADPAWARILGDPSERTRVLLEEQQFLCSQNETLVINGDVEITR
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEE
KNEDLRNAPLNVDLICKRIEFKNGGRILTQSNLQIVADSVEGFMNVESIRGVKGQQGEFA
CCCCHHCCCCCHHEEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCHHH
SAVLEIANTGSAGARGGNGRGGSLTDSPEDGGRGQHGYNGMDGRDGNNGAPGEPGVHASD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
IVVKINRIQGTVGFRIRAVGGEGGTGGKGGRGQQGGNGGVGGDGGRGGNQKYAIWNRSGD
EEEEEEEEECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
GGDGGDGGHGGNGGNGGAGGDGGRGGNGGKIALYVAEVFNTLELTGDEFDNRGGPGGQPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCCCCCCCC
MGGEGGVGGKGGEGGKGGSSGTALVTSSCDVPPCEGDNGRHGKKGLDGKPGLAGPQGRLG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QDGLAGVKILDPKFKFVKSVPDDYFDKLPELGTEKNLKILRMKLP
CCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA