| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is bfr
Identifier: 42523021
GI number: 42523021
Start: 1437156
End: 1437584
Strand: Direct
Name: bfr
Synonym: Bd1514
Alternate gene names: NA
Gene position: 1437156-1437584 (Clockwise)
Preceding gene: 42523020
Following gene: 42523024
Centisome position: 37.99
GC content: 45.45
Gene sequence:
>429_bases ATGACTAAAGAAAACAAAAAAGTAGTAGATCTTTTGAATGAAATTATCGAGATGGAGATCTCTGGCGTTGTTCGTTACTT GCACTATGCATTGATGGTGAAAGGTCCGAACCGCATTCCTATCGTTAAATGGTTCCATGAACAGGCTAACGAAGGTTACC AGCATGCTTCCATGATGGGTGAAAAAGTGACGGCTCTGGGCGGGCACCCCACTTTGCGTGTGTCTCCGGTTCCTGAAACT AAAACCCACAAGGTTTTGGACATCCTTAAAGAAAGTCTTGAGTTCGAACAAGCAGCTTTGGCGAAGTACAAAGCAGTGCT GAAGCACTGTGGTGATGACGTAGCCCTGGAAGAGTTGATCCGCTCCATGGTTCGTATGGAAACTGAGCACATTGAAGAAG TTGTGAAAATGCTGGACACCACTCACTAG
Upstream 100 bases:
>100_bases GTGAAATCGAAAACGATTATCAAGTTTGATTGTTCTCAATACGTTTTCAATTGTTGCCTTGGCTGTCTGATTCTGCAATC ATTCGGGGGGTGGAGGTCTT
Downstream 100 bases:
>100_bases GGTGATCTGACATTCAGAATTGAAAAAGCCCGCGGTAAAGCGGGCTTTTTTGTTTTTAAGATCTAGCGGCAGTTCAGGTC GTGAACAAGGTCGCTGGCAT
Product: bacterioferritin
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Dps Family Ferritin
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTKENKKVVDLLNEIIEMEISGVVRYLHYALMVKGPNRIPIVKWFHEQANEGYQHASMMGEKVTALGGHPTLRVSPVPET KTHKVLDILKESLEFEQAALAKYKAVLKHCGDDVALEELIRSMVRMETEHIEEVVKMLDTTH
Sequences:
>Translated_142_residues MTKENKKVVDLLNEIIEMEISGVVRYLHYALMVKGPNRIPIVKWFHEQANEGYQHASMMGEKVTALGGHPTLRVSPVPET KTHKVLDILKESLEFEQAALAKYKAVLKHCGDDVALEELIRSMVRMETEHIEEVVKMLDTTH >Mature_141_residues TKENKKVVDLLNEIIEMEISGVVRYLHYALMVKGPNRIPIVKWFHEQANEGYQHASMMGEKVTALGGHPTLRVSPVPETK THKVLDILKESLEFEQAALAKYKAVLKHCGDDVALEELIRSMVRMETEHIEEVVKMLDTTH
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16205; Mature: 16074
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKENKKVVDLLNEIIEMEISGVVRYLHYALMVKGPNRIPIVKWFHEQANEGYQHASMMG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHH EKVTALGGHPTLRVSPVPETKTHKVLDILKESLEFEQAALAKYKAVLKHCGDDVALEELI HHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RSMVRMETEHIEEVVKMLDTTH HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKENKKVVDLLNEIIEMEISGVVRYLHYALMVKGPNRIPIVKWFHEQANEGYQHASMMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHH EKVTALGGHPTLRVSPVPETKTHKVLDILKESLEFEQAALAKYKAVLKHCGDDVALEELI HHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RSMVRMETEHIEEVVKMLDTTH HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA