| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is lpxA [H]
Identifier: 42523003
GI number: 42523003
Start: 1415511
End: 1416335
Strand: Direct
Name: lpxA [H]
Synonym: Bd1495
Alternate gene names: 42523003
Gene position: 1415511-1416335 (Clockwise)
Preceding gene: 42523002
Following gene: 42523004
Centisome position: 37.42
GC content: 51.27
Gene sequence:
>825_bases ATGGCAAATTATAAAATTCATCCAAGCAGTGTTATTTCTCCAGACATCCATATCGCCGACGACGTTGAAATCGGCCCTTA CTGCTTGATTCAAGGCAAAGGTTTTATTGGCAAAGGCACATTCGTCGAAGGTCATGTGACACTGGGTTCCCGTCACGGCA TCATCGAAATCGGCGAAAACAATCATTTCTGTCCCGGTGCTGTTATCGGAGGGGCTCCTCAGGACCTTTCCTACAAAGGT GAACCAACCAAATTGATTATCGGTAACAACAATACATTCCGTGAATTCTCCACCGCCAACCTTGCGACCAGCAAAGGGGA CGGCAAAACGGAAATCGGCAATAACGGTTACTTCATGGCCTATACGCACATCGGGCATGACTGCAAAGTCGGCAACAATG TGACCATCGCCAACAACTCCCACTTGGGCGGACACTGTGAAATCGAAGACGGTGTGACCATCGGGGGCGTGTGCGCTTTC AATCAGTTCACCAAAGTGGGGCGCGGTGCTTTCGTGGCCGGTTCTTCCATCGTGAACAAGGACATCCTGCCGTTCTGCCG TGCTCAGGGCACTTACGCGACAATCCGCGCGACCAACAAAATCGGTCTGGCGCGTAAAGGTTTCTCGCGTGAAGAAATCG CAAACGTGCACAAAGCCATCCGTATCATCATCATGGGTTCTCACACCGTGGAAGAAGGCATCGAGCGCATCCTGAATGAG TGCACGATGAGCCCGAACATCGAGTACTTCGTGAACTTCATTCGCTCTTCCAAGCGCGGTATTGCCGTGGACAGAAGCCC TAAAGGATGGCAGGACGATGAGTAA
Upstream 100 bases:
>100_bases CTGACAACTGAAGTAATCGCGGCCTTCGAAAAAGAAAAGTAGTTGATAAGAAAACGAAAGGGCCTGCAAAGGCCCTTTTC TATTTTAGGAATAGAAGTTC
Downstream 100 bases:
>100_bases GAAACTTCGTGGCGCGGTTGTCGGGGTGGGTTACCTCGGTAAATTCCACGCCCAGAAATACAAAAACAATCCGAACGTGG AACTGGTCGGGGTGTGTGAT
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MANYKIHPSSVISPDIHIADDVEIGPYCLIQGKGFIGKGTFVEGHVTLGSRHGIIEIGENNHFCPGAVIGGAPQDLSYKG EPTKLIIGNNNTFREFSTANLATSKGDGKTEIGNNGYFMAYTHIGHDCKVGNNVTIANNSHLGGHCEIEDGVTIGGVCAF NQFTKVGRGAFVAGSSIVNKDILPFCRAQGTYATIRATNKIGLARKGFSREEIANVHKAIRIIIMGSHTVEEGIERILNE CTMSPNIEYFVNFIRSSKRGIAVDRSPKGWQDDE
Sequences:
>Translated_274_residues MANYKIHPSSVISPDIHIADDVEIGPYCLIQGKGFIGKGTFVEGHVTLGSRHGIIEIGENNHFCPGAVIGGAPQDLSYKG EPTKLIIGNNNTFREFSTANLATSKGDGKTEIGNNGYFMAYTHIGHDCKVGNNVTIANNSHLGGHCEIEDGVTIGGVCAF NQFTKVGRGAFVAGSSIVNKDILPFCRAQGTYATIRATNKIGLARKGFSREEIANVHKAIRIIIMGSHTVEEGIERILNE CTMSPNIEYFVNFIRSSKRGIAVDRSPKGWQDDE >Mature_273_residues ANYKIHPSSVISPDIHIADDVEIGPYCLIQGKGFIGKGTFVEGHVTLGSRHGIIEIGENNHFCPGAVIGGAPQDLSYKGE PTKLIIGNNNTFREFSTANLATSKGDGKTEIGNNGYFMAYTHIGHDCKVGNNVTIANNSHLGGHCEIEDGVTIGGVCAFN QFTKVGRGAFVAGSSIVNKDILPFCRAQGTYATIRATNKIGLARKGFSREEIANVHKAIRIIIMGSHTVEEGIERILNEC TMSPNIEYFVNFIRSSKRGIAVDRSPKGWQDDE
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=256, Percent_Identity=36.71875, Blast_Score=171, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 29583; Mature: 29452
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYKIHPSSVISPDIHIADDVEIGPYCLIQGKGFIGKGTFVEGHVTLGSRHGIIEIGEN CCCCEECCCCCCCCCCEEECCCCCCCEEEEECCCCEECCCEEEEEEEECCCCCEEEECCC NHFCPGAVIGGAPQDLSYKGEPTKLIIGNNNTFREFSTANLATSKGDGKTEIGNNGYFMA CCCCCCCEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEECCCCCCCEECCCCEEEE YTHIGHDCKVGNNVTIANNSHLGGHCEIEDGVTIGGVCAFNQFTKVGRGAFVAGSSIVNK EEECCCCEECCCEEEEECCCCCCCEEEECCCEEEEEEEHHHHHHHHCCCEEEECCHHHCC DILPFCRAQGTYATIRATNKIGLARKGFSREEIANVHKAIRIIIMGSHTVEEGIERILNE CCHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHH CTMSPNIEYFVNFIRSSKRGIAVDRSPKGWQDDE HCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure ANYKIHPSSVISPDIHIADDVEIGPYCLIQGKGFIGKGTFVEGHVTLGSRHGIIEIGEN CCCEECCCCCCCCCCEEECCCCCCCEEEEECCCCEECCCEEEEEEEECCCCCEEEECCC NHFCPGAVIGGAPQDLSYKGEPTKLIIGNNNTFREFSTANLATSKGDGKTEIGNNGYFMA CCCCCCCEECCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEECCCCCCCEECCCCEEEE YTHIGHDCKVGNNVTIANNSHLGGHCEIEDGVTIGGVCAFNQFTKVGRGAFVAGSSIVNK EEECCCCEECCCEEEEECCCCCCCEEEECCCEEEEEEEHHHHHHHHCCCEEEECCHHHCC DILPFCRAQGTYATIRATNKIGLARKGFSREEIANVHKAIRIIIMGSHTVEEGIERILNE CCHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHH CTMSPNIEYFVNFIRSSKRGIAVDRSPKGWQDDE HCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA