| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is yjgM [C]
Identifier: 42522964
GI number: 42522964
Start: 1373051
End: 1374034
Strand: Direct
Name: yjgM [C]
Synonym: Bd1451
Alternate gene names: 42522964
Gene position: 1373051-1374034 (Clockwise)
Preceding gene: 42522961
Following gene: 42522965
Centisome position: 36.3
GC content: 48.07
Gene sequence:
>984_bases TTGACTAATTACGTAACTAGTTACATAATTAGTCTTATGGAACTATTCAAACGAGCTGGAAAAATGGCAATGGGTACGCG GGTGCGATTCCTGAGCGAGCAGATCGGTCAGGATGCGGCAGAGATTTACCGTGTGTATGAAAACGATATTCAACCGAAGT GGTTCCCGGTGTTCTATGTTCTTTCAAATGAAGAGCAAAACACGGTCACTTCCATTGCTGAAGCGATCGGGCATTCCCAC GCTTCGGTGAGCAAAATTCTGACTGAAATGTCCAAGGCCGGGCTGGTGCTGGAAAAAACAGACTCTCAGGACCGTCGTCG AACCAAAATCACCCTTTCCAAAAAGGGCAAAGACCTCTCTGAAAAAATAGAAAGACAGTACGCGGACGTCAACGAGGCGA TCGAGCAGATCTCGGCGCAGGCCACGAATAATTTGTGGGCCGCGATTGAAGAGTGGGAATACCTGCTGGGACAGAAGTCT TTGTTGAGCCGGGTTCTGGAGATCAAAAAACGGAGAGAATCTATGGATGTCAAAATCGTAGCTTATCAACCCAAGTACAA AGAGGCCTTTTACAAACTGAATGAAGAATGGATTTCCAAGTACTTCACGATGGAAAAGCCTGATCGTGATGCTTTGGAAA ATCCAGAATCCTATATTCTTAAAAAGGGCGGATCTATTTTTGTCGCTCTATTGAATGGGGAACCTGTCGGTGTCTGTGCT CTGATCAAGCGTGAGGATCTGGGCTGTTACGAGCTTGCGAAGATGGCGGTGTCCCCGAAAGCTCAGGGGAAAAGCATCGG CTTCCTGCTGGGACAGGCGATTGTTGAAAAGGCCCGGGAAATGGGCGAGCAGCGCCTGTTCCTGGAAAGTAACACGATCC TGAAACCAGCCATTCGCCTTTATGAAAAGCTGGGCTTTGTAAAAGTCGTCGGCCCACCAACGCCTTATGACCGCTGCAAT ATCCAGATGGAGCTGAAGTTGTGA
Upstream 100 bases:
>100_bases AGCTTAAGAAGTCGATCATCGACTTTGTTTCCGAAGTGACGCTGACCCATCGGGATTCCTATAGTGAATTCAATGCCTTA TGCGTATCTAGTTGAGAAGG
Downstream 100 bases:
>100_bases TTGTTTCTGATGCGGACTATGAGCTGAAGGTACGAAGCAGTTTTGACAAGCAGAATCTGATGAAGACTCTCGGGGCGCAG CTTGTTGCTGTAGGCCCAGG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase; Transcriptional Regulator MarR Family; Transcriptional Regulator; GNAT Family Acetyltransferase; Transcriptional Regulator MarR Family Protein; MarR-Family Transcriptional Regulator; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; Acetyltransferase Family
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTNYVTSYIISLMELFKRAGKMAMGTRVRFLSEQIGQDAAEIYRVYENDIQPKWFPVFYVLSNEEQNTVTSIAEAIGHSH ASVSKILTEMSKAGLVLEKTDSQDRRRTKITLSKKGKDLSEKIERQYADVNEAIEQISAQATNNLWAAIEEWEYLLGQKS LLSRVLEIKKRRESMDVKIVAYQPKYKEAFYKLNEEWISKYFTMEKPDRDALENPESYILKKGGSIFVALLNGEPVGVCA LIKREDLGCYELAKMAVSPKAQGKSIGFLLGQAIVEKAREMGEQRLFLESNTILKPAIRLYEKLGFVKVVGPPTPYDRCN IQMELKL
Sequences:
>Translated_327_residues MTNYVTSYIISLMELFKRAGKMAMGTRVRFLSEQIGQDAAEIYRVYENDIQPKWFPVFYVLSNEEQNTVTSIAEAIGHSH ASVSKILTEMSKAGLVLEKTDSQDRRRTKITLSKKGKDLSEKIERQYADVNEAIEQISAQATNNLWAAIEEWEYLLGQKS LLSRVLEIKKRRESMDVKIVAYQPKYKEAFYKLNEEWISKYFTMEKPDRDALENPESYILKKGGSIFVALLNGEPVGVCA LIKREDLGCYELAKMAVSPKAQGKSIGFLLGQAIVEKAREMGEQRLFLESNTILKPAIRLYEKLGFVKVVGPPTPYDRCN IQMELKL >Mature_326_residues TNYVTSYIISLMELFKRAGKMAMGTRVRFLSEQIGQDAAEIYRVYENDIQPKWFPVFYVLSNEEQNTVTSIAEAIGHSHA SVSKILTEMSKAGLVLEKTDSQDRRRTKITLSKKGKDLSEKIERQYADVNEAIEQISAQATNNLWAAIEEWEYLLGQKSL LSRVLEIKKRRESMDVKIVAYQPKYKEAFYKLNEEWISKYFTMEKPDRDALENPESYILKKGGSIFVALLNGEPVGVCAL IKREDLGCYELAKMAVSPKAQGKSIGFLLGQAIVEKAREMGEQRLFLESNTILKPAIRLYEKLGFVKVVGPPTPYDRCNI QMELKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 37319; Mature: 37187
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYVTSYIISLMELFKRAGKMAMGTRVRFLSEQIGQDAAEIYRVYENDIQPKWFPVFYV CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEE LSNEEQNTVTSIAEAIGHSHASVSKILTEMSKAGLVLEKTDSQDRRRTKITLSKKGKDLS EECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHEEEECCCCCCHH EKIERQYADVNEAIEQISAQATNNLWAAIEEWEYLLGQKSLLSRVLEIKKRRESMDVKIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEE AYQPKYKEAFYKLNEEWISKYFTMEKPDRDALENPESYILKKGGSIFVALLNGEPVGVCA EECCHHHHHHHHHCHHHHHHHHCCCCCCCHHHCCCHHHHEECCCCEEEEEECCCCCEEEE LIKREDLGCYELAKMAVSPKAQGKSIGFLLGQAIVEKAREMGEQRLFLESNTILKPAIRL EEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHEEEECCCCHHHHHHHH YEKLGFVKVVGPPTPYDRCNIQMELKL HHHCCCEEEECCCCCCCCCCEEEEEEC >Mature Secondary Structure TNYVTSYIISLMELFKRAGKMAMGTRVRFLSEQIGQDAAEIYRVYENDIQPKWFPVFYV CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEE LSNEEQNTVTSIAEAIGHSHASVSKILTEMSKAGLVLEKTDSQDRRRTKITLSKKGKDLS EECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHEEEECCCCCCHH EKIERQYADVNEAIEQISAQATNNLWAAIEEWEYLLGQKSLLSRVLEIKKRRESMDVKIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEE AYQPKYKEAFYKLNEEWISKYFTMEKPDRDALENPESYILKKGGSIFVALLNGEPVGVCA EECCHHHHHHHHHCHHHHHHHHCCCCCCCHHHCCCHHHHEECCCCEEEEEECCCCCEEEE LIKREDLGCYELAKMAVSPKAQGKSIGFLLGQAIVEKAREMGEQRLFLESNTILKPAIRL EEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHEEEECCCCHHHHHHHH YEKLGFVKVVGPPTPYDRCNIQMELKL HHHCCCEEEECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA