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The map label for this gene is ydiI [C]

Identifier: 42522965

GI number: 42522965

Start: 1374031

End: 1374471

Strand: Direct

Name: ydiI [C]

Synonym: Bd1452

Alternate gene names: 42522965

Gene position: 1374031-1374471 (Clockwise)

Preceding gene: 42522964

Following gene: 42522967

Centisome position: 36.32

GC content: 52.38

Gene sequence:

>441_bases
GTGATTGTTTCTGATGCGGACTATGAGCTGAAGGTACGAAGCAGTTTTGACAAGCAGAATCTGATGAAGACTCTCGGGGC
GCAGCTTGTTGCTGTAGGCCCAGGGACTTGCGAGATCGAGCTGCCGTTTTCGTCTTCACTTGGTCAGCAGCACGGTTTTT
TACATGCCGGCGCCACGACTTCAATTGCGGATTCGGCAGCCGGATACGCGGCCTATACGCTGACCCCAAAGGGGTCTTCG
GTTCTGACGACAGAGCTTAAAATCAATTTGCTGTCTCCGGCTCAAGGGGAAAGATTCTTTGCCCGTGCTGAGGTGCTGAA
GGCCGGTAAAACATTGACTGTGGTGACGTCCAAAGTTTTTGCGGTTCAAAAAGGGCAGGAGAAGCTGTGTGCCTTTCTCA
CTGCCAGTATCATGACCGTGCCCCATGCGGAAACAATCTAG

Upstream 100 bases:

>100_bases
TGAAACCAGCCATTCGCCTTTATGAAAAGCTGGGCTTTGTAAAAGTCGTCGGCCCACCAACGCCTTATGACCGCTGCAAT
ATCCAGATGGAGCTGAAGTT

Downstream 100 bases:

>100_bases
AGTTAGAATGTGGCTGCTTTGATGGTCTGAATGATCTTTTTGCTGATGGTGTTGTTGTGTTTTTCCGGTCGGTACGCCAG
ATAGATTTCGTCCTTGAATA

Product: putative phenylacetic acid degradation protein PAAI

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Phenylacetic Acid Degradation Protein; Thioesterase; Phenylacetic Acid Degradation Protein PaaI; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein PAAI; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Domain-Containing Protein; Aromatic Catabolism Protein-Like Protein; Protein Possibly Involved In Aromatic Compounds Catabolism; Phenylacetic Acid Degradation Protein PaaD

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIVSDADYELKVRSSFDKQNLMKTLGAQLVAVGPGTCEIELPFSSSLGQQHGFLHAGATTSIADSAAGYAAYTLTPKGSS
VLTTELKINLLSPAQGERFFARAEVLKAGKTLTVVTSKVFAVQKGQEKLCAFLTASIMTVPHAETI

Sequences:

>Translated_146_residues
MIVSDADYELKVRSSFDKQNLMKTLGAQLVAVGPGTCEIELPFSSSLGQQHGFLHAGATTSIADSAAGYAAYTLTPKGSS
VLTTELKINLLSPAQGERFFARAEVLKAGKTLTVVTSKVFAVQKGQEKLCAFLTASIMTVPHAETI
>Mature_146_residues
MIVSDADYELKVRSSFDKQNLMKTLGAQLVAVGPGTCEIELPFSSSLGQQHGFLHAGATTSIADSAAGYAAYTLTPKGSS
VLTTELKINLLSPAQGERFFARAEVLKAGKTLTVVTSKVFAVQKGQEKLCAFLTASIMTVPHAETI

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15438; Mature: 15438

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSDADYELKVRSSFDKQNLMKTLGAQLVAVGPGTCEIELPFSSSLGQQHGFLHAGATT
CCCCCCCCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCC
SIADSAAGYAAYTLTPKGSSVLTTELKINLLSPAQGERFFARAEVLKAGKTLTVVTSKVF
CCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHEEE
AVQKGQEKLCAFLTASIMTVPHAETI
EECCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIVSDADYELKVRSSFDKQNLMKTLGAQLVAVGPGTCEIELPFSSSLGQQHGFLHAGATT
CCCCCCCCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCC
SIADSAAGYAAYTLTPKGSSVLTTELKINLLSPAQGERFFARAEVLKAGKTLTVVTSKVF
CCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHEEE
AVQKGQEKLCAFLTASIMTVPHAETI
EECCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA