| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is yeiH [C]
Identifier: 42522953
GI number: 42522953
Start: 1354287
End: 1355264
Strand: Direct
Name: yeiH [C]
Synonym: Bd1437
Alternate gene names: 42522953
Gene position: 1354287-1355264 (Clockwise)
Preceding gene: 42522951
Following gene: 42522961
Centisome position: 35.8
GC content: 51.94
Gene sequence:
>978_bases ATGCCTGCCGCGCATAGTGAGTCTATGAACAAAACAAAAATAGCAAAAATTGCGTTTCCGATAGCGGCACTTTTGTGCTT TTTCCCTTTTGTCTCTTCAGCGGCCGCCCTGGTTCTGGGAATCGTATTAGCCGTGGCCCTGGGGAACCCATATGTCGACA AAACCCGCAGCTACACTCATCATCTGCTAAGTCTTTCTGTGATCGGCCTGGGGGCCGGGATGGATTTGATGGTGGTGGGT CGAGTGGGTTTGCAAGGCATCGGTTACACCGTGGTGGGCATATCGTTCACTCTGCTGCTGGGAATGTTGATCGGGCGTAT GCTTAAGATCGAACGGGATACTTCTACATTGATCACAGTGGGCACTGCGATCTGTGGTGGCAGTGCCATTGCGGCGGTGG CTCCTACAATCCGCGCCAAATCTCATGAAGTGTCGGTGGCTTTGGGAACAGTGTTTATGTTGAACGCCTGTGCTCTGGTG ATTTTTCCTTGGATTGGACATCTGCTAAATCTGACACAAACCCAGTTCGGCCTTTGGAGTGCGCTGGCAATTCACGACAC AAGTTCGGTGGTGGGCTCCACACTGCAATACGGTCCTGAATCTTTGCAGGTGGGAACAACAGTTAAACTTGCGCGCGCAT TGTGGATTGTTCCGGTGACCTTCCTGATTGGTTTGTTCTATTTCCGCGGTCAAAAAGTGGAGGGCGGAGCCGGCAAAGCA AAGAAGCCATGGTTCATTCTGGGCTTTTTGATTGCAGCGGCTTTGGTGACTTGGATTCCGGAACTTCGCCCGGTGGGCCA TGTGGTTGAAACCGTGGCAAAGCGCGCCTTGGTGGTGACCTTATTCCTGATTGGTGCCAATCTCACGAAAGAAACCCTGA AAAGTGTCGGCATCAAACCCTTTCTGCAAGGAGTGGGTTTGTGGATCGTGGTGGCGTCCTGCACACTGGGTGCGATTCTG ATTGGTTGGATTCACTAA
Upstream 100 bases:
>100_bases ATTGCAACCTCCTTTGTTCGTGGAAAGCATAAGATGTTGAATCGGCTTTCGCCTAGCACTCCGACAAAATGCATTTTTGC GAATGCTAGGTGACAGAAGG
Downstream 100 bases:
>100_bases AACAAAAAGGCGCTGGTGACAGCGCCTTTTTTATTTTTCCGTCAGGGCTTTCGACCACTGACCAGATTGATGACAAAGCT GATAATGGCCAAGGCCAGGA
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPAAHSESMNKTKIAKIAFPIAALLCFFPFVSSAAALVLGIVLAVALGNPYVDKTRSYTHHLLSLSVIGLGAGMDLMVVG RVGLQGIGYTVVGISFTLLLGMLIGRMLKIERDTSTLITVGTAICGGSAIAAVAPTIRAKSHEVSVALGTVFMLNACALV IFPWIGHLLNLTQTQFGLWSALAIHDTSSVVGSTLQYGPESLQVGTTVKLARALWIVPVTFLIGLFYFRGQKVEGGAGKA KKPWFILGFLIAAALVTWIPELRPVGHVVETVAKRALVVTLFLIGANLTKETLKSVGIKPFLQGVGLWIVVASCTLGAIL IGWIH
Sequences:
>Translated_325_residues MPAAHSESMNKTKIAKIAFPIAALLCFFPFVSSAAALVLGIVLAVALGNPYVDKTRSYTHHLLSLSVIGLGAGMDLMVVG RVGLQGIGYTVVGISFTLLLGMLIGRMLKIERDTSTLITVGTAICGGSAIAAVAPTIRAKSHEVSVALGTVFMLNACALV IFPWIGHLLNLTQTQFGLWSALAIHDTSSVVGSTLQYGPESLQVGTTVKLARALWIVPVTFLIGLFYFRGQKVEGGAGKA KKPWFILGFLIAAALVTWIPELRPVGHVVETVAKRALVVTLFLIGANLTKETLKSVGIKPFLQGVGLWIVVASCTLGAIL IGWIH >Mature_324_residues PAAHSESMNKTKIAKIAFPIAALLCFFPFVSSAAALVLGIVLAVALGNPYVDKTRSYTHHLLSLSVIGLGAGMDLMVVGR VGLQGIGYTVVGISFTLLLGMLIGRMLKIERDTSTLITVGTAICGGSAIAAVAPTIRAKSHEVSVALGTVFMLNACALVI FPWIGHLLNLTQTQFGLWSALAIHDTSSVVGSTLQYGPESLQVGTTVKLARALWIVPVTFLIGLFYFRGQKVEGGAGKAK KPWFILGFLIAAALVTWIPELRPVGHVVETVAKRALVVTLFLIGANLTKETLKSVGIKPFLQGVGLWIVVASCTLGAILI GWIH
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=294, Percent_Identity=27.5510204081633, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1437_BDEBA (Q6MN26)
Other databases:
- EMBL: BX842649 - RefSeq: NP_968333.1 - GeneID: 2735632 - GenomeReviews: BX842601_GR - KEGG: bba:Bd1437 - NMPDR: fig|264462.1.peg.1303 - HOGENOM: HBG669767 - OMA: EHETSIA - ProtClustDB: CLSK2522353 - BioCyc: BBAC264462:BD1437-MONOMER - InterPro: IPR018383
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 34354; Mature: 34222
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xac8f534)-; HASH(0xeba189c)-; HASH(0xea9b2e8)-; HASH(0xd32439c)-; HASH(0xebb186c)-; HASH(0xeb5f2ec)-; HASH(0xda4a1e0)-; HASH(0xebb189c)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAHSESMNKTKIAKIAFPIAALLCFFPFVSSAAALVLGIVLAVALGNPYVDKTRSYTH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH HLLSLSVIGLGAGMDLMVVGRVGLQGIGYTVVGISFTLLLGMLIGRMLKIERDTSTLITV HHHHHHHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GTAICGGSAIAAVAPTIRAKSHEVSVALGTVFMLNACALVIFPWIGHLLNLTQTQFGLWS HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAIHDTSSVVGSTLQYGPESLQVGTTVKLARALWIVPVTFLIGLFYFRGQKVEGGAGKA HHEECCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC KKPWFILGFLIAAALVTWIPELRPVGHVVETVAKRALVVTLFLIGANLTKETLKSVGIKP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHH FLQGVGLWIVVASCTLGAILIGWIH HHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure PAAHSESMNKTKIAKIAFPIAALLCFFPFVSSAAALVLGIVLAVALGNPYVDKTRSYTH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH HLLSLSVIGLGAGMDLMVVGRVGLQGIGYTVVGISFTLLLGMLIGRMLKIERDTSTLITV HHHHHHHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GTAICGGSAIAAVAPTIRAKSHEVSVALGTVFMLNACALVIFPWIGHLLNLTQTQFGLWS HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAIHDTSSVVGSTLQYGPESLQVGTTVKLARALWIVPVTFLIGLFYFRGQKVEGGAGKA HHEECCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC KKPWFILGFLIAAALVTWIPELRPVGHVVETVAKRALVVTLFLIGANLTKETLKSVGIKP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHH FLQGVGLWIVVASCTLGAILIGWIH HHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA