Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522923

Identifier: 42522923

GI number: 42522923

Start: 1328970

End: 1329275

Strand: Direct

Name: 42522923

Synonym: Bd1405

Alternate gene names: NA

Gene position: 1328970-1329275 (Clockwise)

Preceding gene: 42522922

Following gene: 42522924

Centisome position: 35.13

GC content: 50.98

Gene sequence:

>306_bases
ATGATTCAAACTCTTAAAAAACAAATGATGGCGACTCTGATTCTTGCGGGGCTGACAACGGCTCATACAAGCTTTGCTCA
GGAAAAATCCCATGAAGCTTTGCGGGAGGCATTCCGTGCCTGTCACGATGAACTTGGTATTGAACAGCCAGAGCCTGGCC
AAAGACCGCAGGCCCCCGATGAAGAAACCCGAAAAAAAATTGATACCTGTCTGAAAGAAAAGGGCTTTGAAGTCTCTAAG
TTCGGGCGTGGTGGCGGGCCTGGCAAAGGTCGACCTGAGCGTTCCTCGGACGGCGGTGTGCAATAG

Upstream 100 bases:

>100_bases
GCGAAACCCGCTAAAAGCTTTTTAGGCAGTCTTGTTCCGGGACTGTTCCATTCTGCCTCCATAGTCCTTTTCTATTCTTG
AAGAGGACGAGGAGGTCCTT

Downstream 100 bases:

>100_bases
TCAGATTGAGATCGGAAGGGACTCTTGGATTTTGGTGGACTACACTGAATTTCAAGAGTCCAGAGGAACTTTTTAGGAGG
GCTTGTGAAAACACTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPDEETRKKIDTCLKEKGFEVSK
FGRGGGPGKGRPERSSDGGVQ

Sequences:

>Translated_101_residues
MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPDEETRKKIDTCLKEKGFEVSK
FGRGGGPGKGRPERSSDGGVQ
>Mature_101_residues
MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPDEETRKKIDTCLKEKGFEVSK
FGRGGGPGKGRPERSSDGGVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11065; Mature: 11065

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EETRKKIDTCLKEKGFEVSKFGRGGGPGKGRPERSSDGGVQ
HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EETRKKIDTCLKEKGFEVSKFGRGGGPGKGRPERSSDGGVQ
HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA