| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522924
Identifier: 42522924
GI number: 42522924
Start: 1329360
End: 1329641
Strand: Direct
Name: 42522924
Synonym: Bd1407
Alternate gene names: NA
Gene position: 1329360-1329641 (Clockwise)
Preceding gene: 42522923
Following gene: 42522926
Centisome position: 35.14
GC content: 53.19
Gene sequence:
>282_bases GTGAAAACACTGGATAGATGCTCACTGCGCGTGGGCCAGGAATTAGTGATCAGGGAATCAGAGCGCGGAGATGATCTGCA TCGCGGGGATCGTTTGCGGGTTGTCGGATTTCAGATGCTTTCAGAGACCGTCAGTCAGAACTTCCGGATTGGAAGTTCCT TTTACTGGGAGGGGGAGGCCGTTTTTACACGCCTGTATGTGGCGGAACTTAACGGCGGCATGTATCTGGTGTGGCCGGAG GAAACCACCAACGGCCACTTTGATGTCCAATATCTGCGTTAG
Upstream 100 bases:
>100_bases CGGCGGTGTGCAATAGTCAGATTGAGATCGGAAGGGACTCTTGGATTTTGGTGGACTACACTGAATTTCAAGAGTCCAGA GGAACTTTTTAGGAGGGCTT
Downstream 100 bases:
>100_bases TTGCCGCAGACTTCATCCAGGGTGACCTGGTATTTTTCCGGATTGAAGACGCGACCCAGTTTGCCTTTAATACCGCCAGA ACCGCGTCGCTCGATTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKTLDRCSLRVGQELVIRESERGDDLHRGDRLRVVGFQMLSETVSQNFRIGSSFYWEGEAVFTRLYVAELNGGMYLVWPE ETTNGHFDVQYLR
Sequences:
>Translated_93_residues MKTLDRCSLRVGQELVIRESERGDDLHRGDRLRVVGFQMLSETVSQNFRIGSSFYWEGEAVFTRLYVAELNGGMYLVWPE ETTNGHFDVQYLR >Mature_93_residues MKTLDRCSLRVGQELVIRESERGDDLHRGDRLRVVGFQMLSETVSQNFRIGSSFYWEGEAVFTRLYVAELNGGMYLVWPE ETTNGHFDVQYLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10863; Mature: 10863
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLDRCSLRVGQELVIRESERGDDLHRGDRLRVVGFQMLSETVSQNFRIGSSFYWEGEA CCCHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCEECCCEEEECCCE VFTRLYVAELNGGMYLVWPEETTNGHFDVQYLR EEEEEEEEECCCCEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MKTLDRCSLRVGQELVIRESERGDDLHRGDRLRVVGFQMLSETVSQNFRIGSSFYWEGEA CCCHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCEECCCEEEECCCE VFTRLYVAELNGGMYLVWPEETTNGHFDVQYLR EEEEEEEEECCCCEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA