Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522922

Identifier: 42522922

GI number: 42522922

Start: 1328437

End: 1328883

Strand: Direct

Name: 42522922

Synonym: Bd1404

Alternate gene names: NA

Gene position: 1328437-1328883 (Clockwise)

Preceding gene: 42522921

Following gene: 42522923

Centisome position: 35.12

GC content: 50.11

Gene sequence:

>447_bases
ATGAAAAAACTGATGATTTCTGCCTTTGTCCTTTTCTTGTCCCTGAATGCAGGGGCTTCTGTTTCCAAGCTTGTCTGTGT
GCCAGGGTATGAGCCGATGCGTGCTGATGCTGTGATTGAAATTGTCTTCAATCGCACGATCGATCCTCTTAAGCCTGTGA
TTGGCAGTTACAACCTTGGTGCGGTTTTAAAACTTCATGATAAAATCACAGGGCAGACTTACACGCGTTCTGATGTTGTG
TTTGTTCCAGCGACTTCCATGGATGACGTGAATCTGCGCGGGGGCGCGGCGGGCATGGTGCACATCCGGGTCAGCCCGGT
GATGAAGAACGGTGCATTCATGGGCCGTTATACCGGAGACCTTTTCGTAAACGATCTGGATTCCCGGAACTACTACAATC
TGACCGGCTCGGTACAAGAGCCGGGAATTGTTTGCGAAACCCGCTAA

Upstream 100 bases:

>100_bases
TTGGTGGCGTCGCACGCCAAATTCCACCTTATTGAAAGCCAAGTAAGACTGACGACGGTGACACTTGCAAATCATGAGGG
GCTTCAGGTAGAAGTCCTTC

Downstream 100 bases:

>100_bases
AAGCTTTTTAGGCAGTCTTGTTCCGGGACTGTTCCATTCTGCCTCCATAGTCCTTTTCTATTCTTGAAGAGGACGAGGAG
GTCCTTATGATTCAAACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKKLMISAFVLFLSLNAGASVSKLVCVPGYEPMRADAVIEIVFNRTIDPLKPVIGSYNLGAVLKLHDKITGQTYTRSDVV
FVPATSMDDVNLRGGAAGMVHIRVSPVMKNGAFMGRYTGDLFVNDLDSRNYYNLTGSVQEPGIVCETR

Sequences:

>Translated_148_residues
MKKLMISAFVLFLSLNAGASVSKLVCVPGYEPMRADAVIEIVFNRTIDPLKPVIGSYNLGAVLKLHDKITGQTYTRSDVV
FVPATSMDDVNLRGGAAGMVHIRVSPVMKNGAFMGRYTGDLFVNDLDSRNYYNLTGSVQEPGIVCETR
>Mature_148_residues
MKKLMISAFVLFLSLNAGASVSKLVCVPGYEPMRADAVIEIVFNRTIDPLKPVIGSYNLGAVLKLHDKITGQTYTRSDVV
FVPATSMDDVNLRGGAAGMVHIRVSPVMKNGAFMGRYTGDLFVNDLDSRNYYNLTGSVQEPGIVCETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16120; Mature: 16120

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLMISAFVLFLSLNAGASVSKLVCVPGYEPMRADAVIEIVFNRTIDPLKPVIGSYNLG
CCHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCC
AVLKLHDKITGQTYTRSDVVFVPATSMDDVNLRGGAAGMVHIRVSPVMKNGAFMGRYTGD
EEEEEECCCCCCEEECCCEEEEECCCCCCCEECCCCEEEEEEEEEEEECCCEEEEEEECC
LFVNDLDSRNYYNLTGSVQEPGIVCETR
EEEEECCCCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MKKLMISAFVLFLSLNAGASVSKLVCVPGYEPMRADAVIEIVFNRTIDPLKPVIGSYNLG
CCHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCC
AVLKLHDKITGQTYTRSDVVFVPATSMDDVNLRGGAAGMVHIRVSPVMKNGAFMGRYTGD
EEEEEECCCCCCEEECCCEEEEECCCCCCCEECCCCEEEEEEEEEEEECCCEEEEEEECC
LFVNDLDSRNYYNLTGSVQEPGIVCETR
EEEEECCCCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA