| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522923
Identifier: 42522923
GI number: 42522923
Start: 1328970
End: 1329275
Strand: Direct
Name: 42522923
Synonym: Bd1405
Alternate gene names: NA
Gene position: 1328970-1329275 (Clockwise)
Preceding gene: 42522922
Following gene: 42522924
Centisome position: 35.13
GC content: 50.98
Gene sequence:
>306_bases ATGATTCAAACTCTTAAAAAACAAATGATGGCGACTCTGATTCTTGCGGGGCTGACAACGGCTCATACAAGCTTTGCTCA GGAAAAATCCCATGAAGCTTTGCGGGAGGCATTCCGTGCCTGTCACGATGAACTTGGTATTGAACAGCCAGAGCCTGGCC AAAGACCGCAGGCCCCCGATGAAGAAACCCGAAAAAAAATTGATACCTGTCTGAAAGAAAAGGGCTTTGAAGTCTCTAAG TTCGGGCGTGGTGGCGGGCCTGGCAAAGGTCGACCTGAGCGTTCCTCGGACGGCGGTGTGCAATAG
Upstream 100 bases:
>100_bases GCGAAACCCGCTAAAAGCTTTTTAGGCAGTCTTGTTCCGGGACTGTTCCATTCTGCCTCCATAGTCCTTTTCTATTCTTG AAGAGGACGAGGAGGTCCTT
Downstream 100 bases:
>100_bases TCAGATTGAGATCGGAAGGGACTCTTGGATTTTGGTGGACTACACTGAATTTCAAGAGTCCAGAGGAACTTTTTAGGAGG GCTTGTGAAAACACTGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPDEETRKKIDTCLKEKGFEVSK FGRGGGPGKGRPERSSDGGVQ
Sequences:
>Translated_101_residues MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPDEETRKKIDTCLKEKGFEVSK FGRGGGPGKGRPERSSDGGVQ >Mature_101_residues MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPDEETRKKIDTCLKEKGFEVSK FGRGGGPGKGRPERSSDGGVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11065; Mature: 11065
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EETRKKIDTCLKEKGFEVSKFGRGGGPGKGRPERSSDGGVQ HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQTLKKQMMATLILAGLTTAHTSFAQEKSHEALREAFRACHDELGIEQPEPGQRPQAPD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EETRKKIDTCLKEKGFEVSKFGRGGGPGKGRPERSSDGGVQ HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA