| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is ahcY [H]
Identifier: 42522859
GI number: 42522859
Start: 1265722
End: 1267137
Strand: Direct
Name: ahcY [H]
Synonym: Bd1339
Alternate gene names: 42522859
Gene position: 1265722-1267137 (Clockwise)
Preceding gene: 42522858
Following gene: 42522860
Centisome position: 33.46
GC content: 48.23
Gene sequence:
>1416_bases ATGTCATTGACTACGACGAACGGAAAAACCGCTATGAAGAAAAATGCTAAAATGAAAGCTCCTACAGCAACTAAAACTGC TGCTAAAACTCCAGTTGTTGACTACCGAGTCAGCAAAGAAGCAATGGAAAACCCAGAGGTTTTCGCAAAGCTTGCTAAAT GGGGTCGTGAAGAAATCAAGATTGCTGAAACTGAAATGCCAGGTTTGATGGCTCTTCGTAAAGAGTACAAAAAACAGCAG CCTTTGAAAGGCGCTCGTATCGCTGGTTGCCTTCACATGACTATCCAGACAGCGGTTCTGATCGAAACGCTAGTTGAGCT GGGTGCGGAAATCCGCTGGTCTTCTTGCAACATCTTCTCCACTCAGGATCACGCCGCAGCGGCTATCGCGGCAGCGGGCA TTCCGGTATTTGCATGGAAAGGTCTGACTGAGCAGGAATTCAACTGGTGTATCGAACAAACTATCGTGGGTTGGGGCAAA GAAGGCTTCAACATGATCCTGGACGACGGTGGTGATTTGACGAACATGATGCACGAGCCTCGTTTCGCCAAAGAAATGAA GAAAATCATCGGTATCTCTGAAGAGACAACCACCGGTGTCCACAACCTGGAAGTCCTTGTAAAACAGGGTAAACTGAAAG TTCCAGCGATCAACATCAATGACTCTGTTACCAAATCCAAGTTCGACAATCTGTACGGTTGCCGCGAATCTTTGGCTGAC GGTATCAAACGTGCAACGGACGTGATGGTTGCCGGTAAGATCTGCGTTGTTGCGGGTTACGGCGATGTGGGTAAAGGTTC TGCGCACTCTTTGCGTGGACTGGGCGCCCGCGTTCTTGTGACTGAAATCGATCCAATCTGCGCGCTTCAGGCGGCAATGG AAGGTTTCGAAGTGACAACGATGGAAGATGCAGCTCCATTGGGTGACATCTTCGTAACAGCGACTGGCTGCTGCGACATC ATCACTGACAAGCACTTCATGAAAATGAAAAACAACGCGATCGTGTGCAACATCGGTCACTTCGATATCGAAATCGACAT GGCTTGGTTGAACAAGAATTCCAAAATGCGTGAAGTGAAGCCACAAGTGGACATCCACACTTTGAAAAACGGCAAACAAG TCATCATCCTGGCTAAAGGCCGTTTGGTGAATCTGGGTTGTGCTACGGGCCACCCAAGCTTCGTTATGTCCAACTCCTTC ACCAATCAGGTGTTGGCGCAAATGGAACTTTTCAACAACCGTGACAAGTACCAGGACATCGCTGTTTACCGCTTGCCTAA GCATTTGGACGAAAAAGTGGCGGCATTGCACTTGGATAAATTGGGCGTGAAGTTGACTAAACTTTCTTCCAAACAAGCCA AGTACCTGCACATGAGTCCTCAAGGCCCGTTCAAGCCTGAGCACTACCGTTACTAA
Upstream 100 bases:
>100_bases GTCCGCACAATTTGAACATACAGTTCTTGTGACGGATACTGGATATGAAATCTTAACTTTACCATAATTTTTAAAAACCT AAGACAAGGACTTCAATCAA
Downstream 100 bases:
>100_bases TCAACCCGCAAGGGAAGAGGGGCTGCAGAGAGCGTGAAACTCTCGGACAGTCCTCGCGCAAGGGAGCCTTCGTGGCTCCC TTTTTTTTTGCCGTTGGACG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSLTTTNGKTAMKKNAKMKAPTATKTAAKTPVVDYRVSKEAMENPEVFAKLAKWGREEIKIAETEMPGLMALRKEYKKQQ PLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGK EGFNMILDDGGDLTNMMHEPRFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPAININDSVTKSKFDNLYGCRESLAD GIKRATDVMVAGKICVVAGYGDVGKGSAHSLRGLGARVLVTEIDPICALQAAMEGFEVTTMEDAAPLGDIFVTATGCCDI ITDKHFMKMKNNAIVCNIGHFDIEIDMAWLNKNSKMREVKPQVDIHTLKNGKQVIILAKGRLVNLGCATGHPSFVMSNSF TNQVLAQMELFNNRDKYQDIAVYRLPKHLDEKVAALHLDKLGVKLTKLSSKQAKYLHMSPQGPFKPEHYRY
Sequences:
>Translated_471_residues MSLTTTNGKTAMKKNAKMKAPTATKTAAKTPVVDYRVSKEAMENPEVFAKLAKWGREEIKIAETEMPGLMALRKEYKKQQ PLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGK EGFNMILDDGGDLTNMMHEPRFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPAININDSVTKSKFDNLYGCRESLAD GIKRATDVMVAGKICVVAGYGDVGKGSAHSLRGLGARVLVTEIDPICALQAAMEGFEVTTMEDAAPLGDIFVTATGCCDI ITDKHFMKMKNNAIVCNIGHFDIEIDMAWLNKNSKMREVKPQVDIHTLKNGKQVIILAKGRLVNLGCATGHPSFVMSNSF TNQVLAQMELFNNRDKYQDIAVYRLPKHLDEKVAALHLDKLGVKLTKLSSKQAKYLHMSPQGPFKPEHYRY >Mature_470_residues SLTTTNGKTAMKKNAKMKAPTATKTAAKTPVVDYRVSKEAMENPEVFAKLAKWGREEIKIAETEMPGLMALRKEYKKQQP LKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKE GFNMILDDGGDLTNMMHEPRFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPAININDSVTKSKFDNLYGCRESLADG IKRATDVMVAGKICVVAGYGDVGKGSAHSLRGLGARVLVTEIDPICALQAAMEGFEVTTMEDAAPLGDIFVTATGCCDII TDKHFMKMKNNAIVCNIGHFDIEIDMAWLNKNSKMREVKPQVDIHTLKNGKQVIILAKGRLVNLGCATGHPSFVMSNSFT NQVLAQMELFNNRDKYQDIAVYRLPKHLDEKVAALHLDKLGVKLTKLSSKQAKYLHMSPQGPFKPEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=423, Percent_Identity=69.9763593380615, Blast_Score=598, Evalue=1e-171, Organism=Homo sapiens, GI239937451, Length=408, Percent_Identity=70.343137254902, Blast_Score=580, Evalue=1e-165, Organism=Homo sapiens, GI24308043, Length=425, Percent_Identity=52.7058823529412, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI195539337, Length=425, Percent_Identity=52.7058823529412, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI298286489, Length=425, Percent_Identity=52.7058823529412, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI195539349, Length=425, Percent_Identity=52.7058823529412, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI21361647, Length=425, Percent_Identity=52.9411764705882, Blast_Score=425, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17506425, Length=426, Percent_Identity=69.4835680751174, Blast_Score=613, Evalue=1e-176, Organism=Saccharomyces cerevisiae, GI6320882, Length=436, Percent_Identity=66.9724770642202, Blast_Score=579, Evalue=1e-166, Organism=Drosophila melanogaster, GI24642172, Length=422, Percent_Identity=70.8530805687204, Blast_Score=613, Evalue=1e-176, Organism=Drosophila melanogaster, GI24656245, Length=421, Percent_Identity=52.7315914489311, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI45553387, Length=423, Percent_Identity=52.2458628841608, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI45553385, Length=422, Percent_Identity=52.132701421801, Blast_Score=417, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51960; Mature: 51829
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTTTNGKTAMKKNAKMKAPTATKTAAKTPVVDYRVSKEAMENPEVFAKLAKWGREEIK CCEECCCCCHHHHCCCCCCCCCCCCHHCCCCCEEEEECHHHHCCHHHHHHHHHCCHHHEE IAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFS EECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEC TQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKEGFNMILDDGGDLTNMMHEP CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCC RFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPAININDSVTKSKFDNLYGCRESLAD HHHHHHHHHHCCCCCCCCCHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH GIKRATDVMVAGKICVVAGYGDVGKGSAHSLRGLGARVLVTEIDPICALQAAMEGFEVTT HHHHHHHHEEECCEEEEECCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEE MEDAAPLGDIFVTATGCCDIITDKHFMKMKNNAIVCNIGHFDIEIDMAWLNKNSKMREVK ECCCCCCCCEEEEECCCHHHHCCHHHHEECCCEEEEEECCEEEEEEEEEECCCCCHHHCC PQVDIHTLKNGKQVIILAKGRLVNLGCATGHPSFVMSNSFTNQVLAQMELFNNRDKYQDI CCCEEEEECCCCEEEEEECCEEEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHH AVYRLPKHLDEKVAALHLDKLGVKLTKLSSKQAKYLHMSPQGPFKPEHYRY HEECCHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure SLTTTNGKTAMKKNAKMKAPTATKTAAKTPVVDYRVSKEAMENPEVFAKLAKWGREEIK CEECCCCCHHHHCCCCCCCCCCCCHHCCCCCEEEEECHHHHCCHHHHHHHHHCCHHHEE IAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFS EECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEC TQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKEGFNMILDDGGDLTNMMHEP CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCC RFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPAININDSVTKSKFDNLYGCRESLAD HHHHHHHHHHCCCCCCCCCHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH GIKRATDVMVAGKICVVAGYGDVGKGSAHSLRGLGARVLVTEIDPICALQAAMEGFEVTT HHHHHHHHEEECCEEEEECCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEE MEDAAPLGDIFVTATGCCDIITDKHFMKMKNNAIVCNIGHFDIEIDMAWLNKNSKMREVK ECCCCCCCCEEEEECCCHHHHCCHHHHEECCCEEEEEECCEEEEEEEEEECCCCCHHHCC PQVDIHTLKNGKQVIILAKGRLVNLGCATGHPSFVMSNSFTNQVLAQMELFNNRDKYQDI CCCEEEEECCCCEEEEEECCEEEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHH AVYRLPKHLDEKVAALHLDKLGVKLTKLSSKQAKYLHMSPQGPFKPEHYRY HEECCHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA