| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522834
Identifier: 42522834
GI number: 42522834
Start: 1241462
End: 1242319
Strand: Direct
Name: 42522834
Synonym: Bd1313
Alternate gene names: NA
Gene position: 1241462-1242319 (Clockwise)
Preceding gene: 42522833
Following gene: 42522838
Centisome position: 32.82
GC content: 49.42
Gene sequence:
>858_bases ATGAAAAAAATGACAGTGTTGTTCTTCCTTGCTGTTAATATGTTTTGCCCATTGGCATGGGCCGAGGACATCACATGGAT CCGTTGGGATGATCCGCCCATTTTTATTTTTAGCGGCCCATTTAAAGGGCGGGGGCTGCTGGATAACGTAGAGAGTGAAC TTCGTCGGAAGCTTCCCCAGTACACCCACAAGACCATCGAGGGCACGGTCCCCCGGGTTTTGAAAGAGGCCGAAGCCAAA GCTCCGGTGTGTAATGCGGGCTGGCTGGATACGCCGGAGTGGTCCAAGCTGTTTTATTTTTCAAGGCCGGTCTTTGTGAT TCCTGCCAATGGGATTCTTCTGCCAAAAAGTCGGCTGGTGGAGGTCAGAAATCTGGCGCCCTATTCATTGCAAAAGTTCC TGGATGATAAAAAAGACTGGAAGCTCGGGGTGGGAAGACTTTACGGCGTTGGTATTGATGATGTGCTGATTAAGAACAAC TATCAGAAAAACCCGCAGGTTATCACCATCGCGACCAGCCTTCGTGTGCACAAAATGCTTCATTCCAATCGGATTCAGTA CACCTTGGGATATCCCTTTGAAGCGGTCTATTACAACAAACTGCTGGATGGGAAGAACAACGAGGTCGTGCATATCCCGG TGACTGAAAATGCAGCCCGTGTGGAGGTCGTGGTGGCTTGTCCTAAAACTCCGTGGGGAGCCAAAGTCATCGCGGATATC GATCAGGTTTTGCAAAACAGAGCACTGCTGGAAAAATTTGAAAAAGGGGTGGACCGCTGGCTCAGCATTGAGGACCAGGA AAAACTCGCTCCGGCCCGTAAAGAATTTTATCGAAAGAACTATCCTTCGCTCAAGTGA
Upstream 100 bases:
>100_bases AGGTGCCTGGTTGTTTTATCTGGCTACAGTGCAGAATCTTGTTCGAAATACATTTATCCTGCCCCCTCAGACTGAGCTAT CGTAAAGGCCTGAGGCCTTG
Downstream 100 bases:
>100_bases TCGACACCGCACAAGGCGTGCAGTTTGGCTTTGAACTCTGTTGGTTTTTTAAGAACCTTGATTTCATCAAAGATCGCCTT GGCTTCCTGATTTTTCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKKMTVLFFLAVNMFCPLAWAEDITWIRWDDPPIFIFSGPFKGRGLLDNVESELRRKLPQYTHKTIEGTVPRVLKEAEAK APVCNAGWLDTPEWSKLFYFSRPVFVIPANGILLPKSRLVEVRNLAPYSLQKFLDDKKDWKLGVGRLYGVGIDDVLIKNN YQKNPQVITIATSLRVHKMLHSNRIQYTLGYPFEAVYYNKLLDGKNNEVVHIPVTENAARVEVVVACPKTPWGAKVIADI DQVLQNRALLEKFEKGVDRWLSIEDQEKLAPARKEFYRKNYPSLK
Sequences:
>Translated_285_residues MKKMTVLFFLAVNMFCPLAWAEDITWIRWDDPPIFIFSGPFKGRGLLDNVESELRRKLPQYTHKTIEGTVPRVLKEAEAK APVCNAGWLDTPEWSKLFYFSRPVFVIPANGILLPKSRLVEVRNLAPYSLQKFLDDKKDWKLGVGRLYGVGIDDVLIKNN YQKNPQVITIATSLRVHKMLHSNRIQYTLGYPFEAVYYNKLLDGKNNEVVHIPVTENAARVEVVVACPKTPWGAKVIADI DQVLQNRALLEKFEKGVDRWLSIEDQEKLAPARKEFYRKNYPSLK >Mature_285_residues MKKMTVLFFLAVNMFCPLAWAEDITWIRWDDPPIFIFSGPFKGRGLLDNVESELRRKLPQYTHKTIEGTVPRVLKEAEAK APVCNAGWLDTPEWSKLFYFSRPVFVIPANGILLPKSRLVEVRNLAPYSLQKFLDDKKDWKLGVGRLYGVGIDDVLIKNN YQKNPQVITIATSLRVHKMLHSNRIQYTLGYPFEAVYYNKLLDGKNNEVVHIPVTENAARVEVVVACPKTPWGAKVIADI DQVLQNRALLEKFEKGVDRWLSIEDQEKLAPARKEFYRKNYPSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32849; Mature: 32849
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMTVLFFLAVNMFCPLAWAEDITWIRWDDPPIFIFSGPFKGRGLLDNVESELRRKLPQ CCCHHHHHHHHHHHHCCCHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH YTHKTIEGTVPRVLKEAEAKAPVCNAGWLDTPEWSKLFYFSRPVFVIPANGILLPKSRLV HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEECCHHHHH EVRNLAPYSLQKFLDDKKDWKLGVGRLYGVGIDDVLIKNNYQKNPQVITIATSLRVHKML HHHCCCHHHHHHHHCCCCCCEECCCEEECCCCHHEEECCCCCCCCEEEEEEHHHHHHHHH HSNRIQYTLGYPFEAVYYNKLLDGKNNEVVHIPVTENAARVEVVVACPKTPWGAKVIADI HCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHH DQVLQNRALLEKFEKGVDRWLSIEDQEKLAPARKEFYRKNYPSLK HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKKMTVLFFLAVNMFCPLAWAEDITWIRWDDPPIFIFSGPFKGRGLLDNVESELRRKLPQ CCCHHHHHHHHHHHHCCCHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH YTHKTIEGTVPRVLKEAEAKAPVCNAGWLDTPEWSKLFYFSRPVFVIPANGILLPKSRLV HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEECCHHHHH EVRNLAPYSLQKFLDDKKDWKLGVGRLYGVGIDDVLIKNNYQKNPQVITIATSLRVHKML HHHCCCHHHHHHHHCCCCCCEECCCEEECCCCHHEEECCCCCCCCEEEEEEHHHHHHHHH HSNRIQYTLGYPFEAVYYNKLLDGKNNEVVHIPVTENAARVEVVVACPKTPWGAKVIADI HCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHH DQVLQNRALLEKFEKGVDRWLSIEDQEKLAPARKEFYRKNYPSLK HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA