| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is acs
Identifier: 42522828
GI number: 42522828
Start: 1234410
End: 1236347
Strand: Direct
Name: acs
Synonym: Bd1306
Alternate gene names: 42522828
Gene position: 1234410-1236347 (Clockwise)
Preceding gene: 42522827
Following gene: 42522829
Centisome position: 32.63
GC content: 53.1
Gene sequence:
>1938_bases ATGCACAAAGAACTTTATCCCGTGAATTCCGAGGTGGCGAAAAAAGCCTGGATTGATGAAGCCAAATACAAAGCCATGTA TGAGCGCTCCATTCAAGACAACGAAGCCTTTTGGGCCGAGCAAGCCGAGCGCCTGGACTGGATCAAAAAGTGGGATAAGG TCAAAGAAGTCAGTTTCAAGAAACCCGTTAGCATCAAATGGTACTTGGGTGGAAAAATGAATGTGTCCTACAATTGCGTG GACCGTCATTTAAAAACCCGCGGCGACAAAACAGCCCTGCTGTGGGAAGCCGACAATCCATCCACACCTTCACGCAAAAT CACTTACAAAGAACTGCATCTGGAAGTGTGCCGCTTCGCCAATGTCCTGAAAAAAATGGGCGTGAAAAAAGGCGATGTGG TGACGATCTATATGCCGATGATTCCGGATACAGCCGTGGCGATGCTGGCCTGTGCGCGCATCGGGGCGGTTCATTCGGTG GTGTTTGCCGGTTTTTCTCCGGATTCCATCTCAGATCGTATTTTGGACGGGCAGTGCCGGTTTGTGATCACCGGTGATGC CGGCTTCCGCGGCAGCAAAGTGGTGGCGTTAAAAGAAAATATCGATAAAGCACTTGTGAAAACTCCGGACGTGCAAAAAG TTCTGGTGGTGAAATATGCGGGCACGACGGTGGACATGAAGCCGGGCCGTGATCTTTGGTATCACGAAGAAGTCAAAACC GTCAGCGACCAGTGTGAACCAGAACCCATGGACGCGGAAGATCCTTTGTTTATTCTTTACACTTCCGGTTCCACAGGAAA ACCCAAAGGGGTGATGCACACCACGGGGGGATATCTGGTGTATGCCAGCATGACCCACCAGTATGTCTTTGATTATCACG AAGATGATATCTACTGGTGTTCTGCTGACGTGGGTTGGGTGACCGGCCATAGCTATATCGTGTATGGCCCGCTGGCGAAT GGGGCGACAAGTTTGTTCTTTGAAGGGGTGCCGAACTATCCAACTCCAAGCCGTTTCTGGGAAGTGGTCGACAAACACAA AGTCACAATATTCTATACCTCACCAACGGCGATTCGTTCTTTGATGCGCGAAGGGGACGCGGCGGTGAAAACCACCTCGC GAAAAACCCTGCGCCTGCTGGGGTCCGTCGGGGAGCCGATCAATCCGGAAGCCTGGGCATGGTATCACGATGTGGTCGGT GAAGGACGCTGCCCGGTTGTCGATACATGGTGGCAGACAGAAACCGGTGGCATTCTGATCACGCCACTGCCGGGGGCGAT TGCGCAAAAGCCGGGGTCTGCAACTTTACCGTTCTTTGGGGTGCAACCGAAACTTTTGACCAACGAAGGACAAGAGATCC ATGGACCGGGCGAAGGGGTGCTGGTGATTGCGGATTCCTGGCCGGGCCAGATGCGCACGGTGTATCGCAATCACGAACGT TTTGAAGACACGTATTTCTCGAACTATCCCGGGTACTATTTCACAGGCGACGGCTGTCGTCGCGATCAGGACGGGTATTA CTGGATCACGGGACGGGTGGATGACGTGATCAACGTTTCCGGTCACCGCCTGGGGACGGCTGAAATTGAATCAGCGCTTG TGGCCCATCACAAAGTGGCTGAAGCCGCCGTGGTTGGATATCCACATGATATCAAAGGGCAGGGGATTTATGCCTTTGTC ACCTTGAAGTCCGGTGAAACGGCCAGTGAAGAGCTGCGTAAAGAGCTGATTCAGACCGTGCGTAAAGAGATCGGGCCGAT TGCGACTCCGGATCTGATTCAGTGGGCTCCACGTCTGCCGAAGACCCGTTCTGGCAAGATTATGCGCCGAATCCTGCGTA AAATCGCCGAGAACCACCCGGATCAACTGGGGGATACGACAACCTTGTCAGAGCCTGCGGTGGTCCAAGAACTGGTGGAC AATCGCATGAACCGGTGA
Upstream 100 bases:
>100_bases TATTGTGCAACAGGCGCTTAATTAACACTTTTAAATACTTTCCTGGGCGTTAACGTTTGACCTCATTCTCAGTTGATTTA CGATTGAGAATGAGGTGACT
Downstream 100 bases:
>100_bases TAGCTTGCGCGTCATGAACACACGTATGATGACCCTGATTTTGATGGTGCTTGTTGCGGCTTTCAGCCGTTTGATCCCTC ATCCTTGGAACTTCACCGCG
Product: acetyl coenzyme A synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MHKELYPVNSEVAKKAWIDEAKYKAMYERSIQDNEAFWAEQAERLDWIKKWDKVKEVSFKKPVSIKWYLGGKMNVSYNCV DRHLKTRGDKTALLWEADNPSTPSRKITYKELHLEVCRFANVLKKMGVKKGDVVTIYMPMIPDTAVAMLACARIGAVHSV VFAGFSPDSISDRILDGQCRFVITGDAGFRGSKVVALKENIDKALVKTPDVQKVLVVKYAGTTVDMKPGRDLWYHEEVKT VSDQCEPEPMDAEDPLFILYTSGSTGKPKGVMHTTGGYLVYASMTHQYVFDYHEDDIYWCSADVGWVTGHSYIVYGPLAN GATSLFFEGVPNYPTPSRFWEVVDKHKVTIFYTSPTAIRSLMREGDAAVKTTSRKTLRLLGSVGEPINPEAWAWYHDVVG EGRCPVVDTWWQTETGGILITPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHER FEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVINVSGHRLGTAEIESALVAHHKVAEAAVVGYPHDIKGQGIYAFV TLKSGETASEELRKELIQTVRKEIGPIATPDLIQWAPRLPKTRSGKIMRRILRKIAENHPDQLGDTTTLSEPAVVQELVD NRMNR
Sequences:
>Translated_645_residues MHKELYPVNSEVAKKAWIDEAKYKAMYERSIQDNEAFWAEQAERLDWIKKWDKVKEVSFKKPVSIKWYLGGKMNVSYNCV DRHLKTRGDKTALLWEADNPSTPSRKITYKELHLEVCRFANVLKKMGVKKGDVVTIYMPMIPDTAVAMLACARIGAVHSV VFAGFSPDSISDRILDGQCRFVITGDAGFRGSKVVALKENIDKALVKTPDVQKVLVVKYAGTTVDMKPGRDLWYHEEVKT VSDQCEPEPMDAEDPLFILYTSGSTGKPKGVMHTTGGYLVYASMTHQYVFDYHEDDIYWCSADVGWVTGHSYIVYGPLAN GATSLFFEGVPNYPTPSRFWEVVDKHKVTIFYTSPTAIRSLMREGDAAVKTTSRKTLRLLGSVGEPINPEAWAWYHDVVG EGRCPVVDTWWQTETGGILITPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHER FEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVINVSGHRLGTAEIESALVAHHKVAEAAVVGYPHDIKGQGIYAFV TLKSGETASEELRKELIQTVRKEIGPIATPDLIQWAPRLPKTRSGKIMRRILRKIAENHPDQLGDTTTLSEPAVVQELVD NRMNR >Mature_645_residues MHKELYPVNSEVAKKAWIDEAKYKAMYERSIQDNEAFWAEQAERLDWIKKWDKVKEVSFKKPVSIKWYLGGKMNVSYNCV DRHLKTRGDKTALLWEADNPSTPSRKITYKELHLEVCRFANVLKKMGVKKGDVVTIYMPMIPDTAVAMLACARIGAVHSV VFAGFSPDSISDRILDGQCRFVITGDAGFRGSKVVALKENIDKALVKTPDVQKVLVVKYAGTTVDMKPGRDLWYHEEVKT VSDQCEPEPMDAEDPLFILYTSGSTGKPKGVMHTTGGYLVYASMTHQYVFDYHEDDIYWCSADVGWVTGHSYIVYGPLAN GATSLFFEGVPNYPTPSRFWEVVDKHKVTIFYTSPTAIRSLMREGDAAVKTTSRKTLRLLGSVGEPINPEAWAWYHDVVG EGRCPVVDTWWQTETGGILITPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHER FEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVINVSGHRLGTAEIESALVAHHKVAEAAVVGYPHDIKGQGIYAFV TLKSGETASEELRKELIQTVRKEIGPIATPDLIQWAPRLPKTRSGKIMRRILRKIAENHPDQLGDTTTLSEPAVVQELVD NRMNR
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family
Homologues:
Organism=Homo sapiens, GI8923896, Length=665, Percent_Identity=55.187969924812, Blast_Score=738, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=678, Percent_Identity=54.1297935103245, Blast_Score=733, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=621, Percent_Identity=51.207729468599, Blast_Score=646, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=637, Percent_Identity=38.1475667189953, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI31982927, Length=609, Percent_Identity=26.4367816091954, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI42544132, Length=516, Percent_Identity=28.8759689922481, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI38505220, Length=516, Percent_Identity=29.4573643410853, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI122937307, Length=517, Percent_Identity=28.4332688588008, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI115511026, Length=536, Percent_Identity=27.2388059701493, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI58082049, Length=516, Percent_Identity=26.5503875968992, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI157311624, Length=516, Percent_Identity=25.968992248062, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI157311622, Length=516, Percent_Identity=25.968992248062, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI187761345, Length=401, Percent_Identity=27.431421446384, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI187761343, Length=401, Percent_Identity=27.431421446384, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI42544134, Length=349, Percent_Identity=24.6418338108883, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI195947378, Length=402, Percent_Identity=25.1243781094527, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI156151445, Length=600, Percent_Identity=22.8333333333333, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1790505, Length=646, Percent_Identity=63.4674922600619, Blast_Score=860, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=630, Percent_Identity=35.7142857142857, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI221142682, Length=541, Percent_Identity=23.1053604436229, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1788107, Length=569, Percent_Identity=24.780316344464, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI145693145, Length=507, Percent_Identity=22.4852071005917, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786810, Length=527, Percent_Identity=21.6318785578748, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71983001, Length=641, Percent_Identity=52.7301092043682, Blast_Score=660, Evalue=0.0, Organism=Caenorhabditis elegans, GI71982997, Length=641, Percent_Identity=52.7301092043682, Blast_Score=660, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=636, Percent_Identity=22.9559748427673, Blast_Score=148, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17558820, Length=512, Percent_Identity=23.6328125, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI32563687, Length=516, Percent_Identity=23.6434108527132, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17557194, Length=551, Percent_Identity=24.3194192377495, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17538037, Length=146, Percent_Identity=32.8767123287671, Blast_Score=80, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71985884, Length=392, Percent_Identity=23.469387755102, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323182, Length=653, Percent_Identity=49.9234303215926, Blast_Score=644, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=639, Percent_Identity=49.9217527386541, Blast_Score=634, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319699, Length=367, Percent_Identity=25.6130790190736, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24667955, Length=662, Percent_Identity=53.6253776435045, Blast_Score=725, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=57.8291814946619, Blast_Score=671, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=57.8846153846154, Blast_Score=622, Evalue=1e-178, Organism=Drosophila melanogaster, GI21355225, Length=631, Percent_Identity=36.608557844691, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI18859661, Length=535, Percent_Identity=25.2336448598131, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI21355181, Length=550, Percent_Identity=23.2727272727273, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24648260, Length=529, Percent_Identity=25.1417769376182, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24656500, Length=364, Percent_Identity=21.7032967032967, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACSA_BDEBA (Q6MNF1)
Other databases:
- EMBL: BX842649 - RefSeq: NP_968208.1 - HSSP: Q8ZKF6 - ProteinModelPortal: Q6MNF1 - SMR: Q6MNF1 - GeneID: 2734497 - GenomeReviews: BX842601_GR - KEGG: bba:Bd1306 - NMPDR: fig|264462.1.peg.1178 - HOGENOM: HBG547964 - OMA: ATYLEWY - PhylomeDB: Q6MNF1 - BioCyc: BBAC264462:BD1306-MONOMER - BRENDA: 6.2.1.1 - HAMAP: MF_01123 - InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 - TIGRFAMs: TIGR02188
Pfam domain/function: PF00501 AMP-binding
EC number: =6.2.1.1
Molecular weight: Translated: 72415; Mature: 72415
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00455 AMP_BINDING
Important sites: ACT_SITE 514-514
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKELYPVNSEVAKKAWIDEAKYKAMYERSIQDNEAFWAEQAERLDWIKKWDKVKEVSFK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KPVSIKWYLGGKMNVSYNCVDRHLKTRGDKTALLWEADNPSTPSRKITYKELHLEVCRFA CCCEEEEEECCEEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHH NVLKKMGVKKGDVVTIYMPMIPDTAVAMLACARIGAVHSVVFAGFSPDSISDRILDGQCR HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCEE FVITGDAGFRGSKVVALKENIDKALVKTPDVQKVLVVKYAGTTVDMKPGRDLWYHEEVKT EEEECCCCCCCCEEEEEHHCCHHHHHCCCCCCEEEEEEEECCEEECCCCCCCCCHHHHHH VSDQCEPEPMDAEDPLFILYTSGSTGKPKGVMHTTGGYLVYASMTHQYVFDYHEDDIYWC HHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCEEEEEEECCCCEEEE SADVGWVTGHSYIVYGPLANGATSLFFEGVPNYPTPSRFWEVVDKHKVTIFYTSPTAIRS ECCCCEEECCCEEEEECCCCCCHHHEECCCCCCCCHHHHHHHHHCCEEEEEEECHHHHHH LMREGDAAVKTTSRKTLRLLGSVGEPINPEAWAWYHDVVGEGRCPVVDTWWQTETGGILI HHHCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCEEE TPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHER ECCCCHHHCCCCCCCCCEECCCCCEECCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHH FEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVINVSGHRLGTAEIESALVAHHKVA HHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHH EAAVVGYPHDIKGQGIYAFVTLKSGETASEELRKELIQTVRKEIGPIATPDLIQWAPRLP HHHEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC KTRSGKIMRRILRKIAENHPDQLGDTTTLSEPAVVQELVDNRMNR CCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MHKELYPVNSEVAKKAWIDEAKYKAMYERSIQDNEAFWAEQAERLDWIKKWDKVKEVSFK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KPVSIKWYLGGKMNVSYNCVDRHLKTRGDKTALLWEADNPSTPSRKITYKELHLEVCRFA CCCEEEEEECCEEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHH NVLKKMGVKKGDVVTIYMPMIPDTAVAMLACARIGAVHSVVFAGFSPDSISDRILDGQCR HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCEE FVITGDAGFRGSKVVALKENIDKALVKTPDVQKVLVVKYAGTTVDMKPGRDLWYHEEVKT EEEECCCCCCCCEEEEEHHCCHHHHHCCCCCCEEEEEEEECCEEECCCCCCCCCHHHHHH VSDQCEPEPMDAEDPLFILYTSGSTGKPKGVMHTTGGYLVYASMTHQYVFDYHEDDIYWC HHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCEEEEEEECCCCEEEE SADVGWVTGHSYIVYGPLANGATSLFFEGVPNYPTPSRFWEVVDKHKVTIFYTSPTAIRS ECCCCEEECCCEEEEECCCCCCHHHEECCCCCCCCHHHHHHHHHCCEEEEEEECHHHHHH LMREGDAAVKTTSRKTLRLLGSVGEPINPEAWAWYHDVVGEGRCPVVDTWWQTETGGILI HHHCCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCEEE TPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHER ECCCCHHHCCCCCCCCCEECCCCCEECCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHH FEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVINVSGHRLGTAEIESALVAHHKVA HHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHH EAAVVGYPHDIKGQGIYAFVTLKSGETASEELRKELIQTVRKEIGPIATPDLIQWAPRLP HHHEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC KTRSGKIMRRILRKIAENHPDQLGDTTTLSEPAVVQELVDNRMNR CCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA