| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522829
Identifier: 42522829
GI number: 42522829
Start: 1236352
End: 1236879
Strand: Direct
Name: 42522829
Synonym: Bd1307
Alternate gene names: NA
Gene position: 1236352-1236879 (Clockwise)
Preceding gene: 42522828
Following gene: 42522830
Centisome position: 32.68
GC content: 49.81
Gene sequence:
>528_bases TTGCGCGTCATGAACACACGTATGATGACCCTGATTTTGATGGTGCTTGTTGCGGCTTTCAGCCGTTTGATCCCTCATCC TTGGAACTTCACCGCGATTGGTGCGATGGCTTTGTTTGGTGGGGCTTACTTCCCATCCAAAAAACAATCTTTGTTGATCC CGCTGGCAGCGCTGTTTATCAGCGATCTGGCGTTGGGTTTCCATAACACCATGTTGTTTGTCTACCTGGGTTTCACTTTG GTGGTGATGCTGGGGTGGGCTTTGCGCGATCAAAGAAGCGTTTTCAAAGTGGGCACTTCCGCTTTGGTGACAAGCTCTGT GTTCTTCCTGATCTCCAACTTTGGTGTTTGGGCGATGGGCACAATGTATGCTCCGACCTTCAACGGTCTGGTGCAGTGTC TGGTTGCGGGCATCCCGTTCTTTGACAACCAGATCTACGGAGACTTGTTCTTCTCTGGTTTGTTGTTCGGTGGCTATGAA GCCATCAAAAAATACGCGCCAGAATTCGTCGGCGCTCCTGTAAAATAA
Upstream 100 bases:
>100_bases ATCGCCGAGAACCACCCGGATCAACTGGGGGATACGACAACCTTGTCAGAGCCTGCGGTGGTCCAAGAACTGGTGGACAA TCGCATGAACCGGTGATAGC
Downstream 100 bases:
>100_bases GACTGTGAAACTGGGGCTGCATCGTCCGGTTCTGGACGGTAAAGTGAACTTCCCGTTGTGTCTGGCCCCGATGGTGGGCC TGACTCACGTGGCTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRVMNTRMMTLILMVLVAAFSRLIPHPWNFTAIGAMALFGGAYFPSKKQSLLIPLAALFISDLALGFHNTMLFVYLGFTL VVMLGWALRDQRSVFKVGTSALVTSSVFFLISNFGVWAMGTMYAPTFNGLVQCLVAGIPFFDNQIYGDLFFSGLLFGGYE AIKKYAPEFVGAPVK
Sequences:
>Translated_175_residues MRVMNTRMMTLILMVLVAAFSRLIPHPWNFTAIGAMALFGGAYFPSKKQSLLIPLAALFISDLALGFHNTMLFVYLGFTL VVMLGWALRDQRSVFKVGTSALVTSSVFFLISNFGVWAMGTMYAPTFNGLVQCLVAGIPFFDNQIYGDLFFSGLLFGGYE AIKKYAPEFVGAPVK >Mature_175_residues MRVMNTRMMTLILMVLVAAFSRLIPHPWNFTAIGAMALFGGAYFPSKKQSLLIPLAALFISDLALGFHNTMLFVYLGFTL VVMLGWALRDQRSVFKVGTSALVTSSVFFLISNFGVWAMGTMYAPTFNGLVQCLVAGIPFFDNQIYGDLFFSGLLFGGYE AIKKYAPEFVGAPVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19294; Mature: 19294
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMNTRMMTLILMVLVAAFSRLIPHPWNFTAIGAMALFGGAYFPSKKQSLLIPLAALFI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH SDLALGFHNTMLFVYLGFTLVVMLGWALRDQRSVFKVGTSALVTSSVFFLISNFGVWAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TMYAPTFNGLVQCLVAGIPFFDNQIYGDLFFSGLLFGGYEAIKKYAPEFVGAPVK HHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRVMNTRMMTLILMVLVAAFSRLIPHPWNFTAIGAMALFGGAYFPSKKQSLLIPLAALFI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH SDLALGFHNTMLFVYLGFTLVVMLGWALRDQRSVFKVGTSALVTSSVFFLISNFGVWAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TMYAPTFNGLVQCLVAGIPFFDNQIYGDLFFSGLLFGGYEAIKKYAPEFVGAPVK HHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA