| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522824
Identifier: 42522824
GI number: 42522824
Start: 1232363
End: 1232686
Strand: Direct
Name: 42522824
Synonym: Bd1302
Alternate gene names: NA
Gene position: 1232363-1232686 (Clockwise)
Preceding gene: 42522822
Following gene: 42522825
Centisome position: 32.58
GC content: 51.23
Gene sequence:
>324_bases ATGCGTGAAATAAGCTGTGAACAACTGAAAGAAAGAATGAACGAATTCCGTCTGGTGGATGTGCGCACCCCCGAAGAATA CACCGGGGAGCTGGGGCATATTGCGGGCACCGAGCTGCGCCCGCTCGGCCCTGAACTGCTGGATTTTTTGAAAACCCTGA ACCCGTCCGAGAATATTGTCTTTGTTTGTCGGAGTGGGGCAAGATCAGGGCAGACGACACTTCTCAGTGAAGAGATGGGA TTCACCAGCACCTACAACATGGTGGGCGGAATGTTACGCTGGAATGAAATGGGATATGCAGTGACTAAAGGAGCAGGAAA ATGA
Upstream 100 bases:
>100_bases GACATAAGAAAAGGTTTTTCTTTATGTTCCCGGGCATAACACCCAGACCGAGGATAGCCTTAGGATGAAGTCCTGTGAAG CCAAATAAGCGAGGACTGCT
Downstream 100 bases:
>100_bases TGAACAGTATTTTGATGGCGTTGGCGGGTGGGGCTTTGATTGGTCTTGCGGCCTCGTTGATGTTGATTTTAAACGGTCGG GTCACGGGTATCAGTGGCAT
Product: putative molybdopterin biosynthesis protein
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; Rhodanese Domain Protein; Molybdopterin Biosynthesis Protein; Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MREISCEQLKERMNEFRLVDVRTPEEYTGELGHIAGTELRPLGPELLDFLKTLNPSENIVFVCRSGARSGQTTLLSEEMG FTSTYNMVGGMLRWNEMGYAVTKGAGK
Sequences:
>Translated_107_residues MREISCEQLKERMNEFRLVDVRTPEEYTGELGHIAGTELRPLGPELLDFLKTLNPSENIVFVCRSGARSGQTTLLSEEMG FTSTYNMVGGMLRWNEMGYAVTKGAGK >Mature_107_residues MREISCEQLKERMNEFRLVDVRTPEEYTGELGHIAGTELRPLGPELLDFLKTLNPSENIVFVCRSGARSGQTTLLSEEMG FTSTYNMVGGMLRWNEMGYAVTKGAGK
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11993; Mature: 11993
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50206 RHODANESE_3 ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREISCEQLKERMNEFRLVDVRTPEEYTGELGHIAGTELRPLGPELLDFLKTLNPSENIV CCCCCHHHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE FVCRSGARSGQTTLLSEEMGFTSTYNMVGGMLRWNEMGYAVTKGAGK EEECCCCCCCCEEEEHHCCCCCHHHHHHCCHHEECCCCEEECCCCCC >Mature Secondary Structure MREISCEQLKERMNEFRLVDVRTPEEYTGELGHIAGTELRPLGPELLDFLKTLNPSENIV CCCCCHHHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE FVCRSGARSGQTTLLSEEMGFTSTYNMVGGMLRWNEMGYAVTKGAGK EEECCCCCCCCEEEEHHCCCCCHHHHHHCCHHEECCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA