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The map label for this gene is fnr [H]

Identifier: 42522822

GI number: 42522822

Start: 1230739

End: 1231335

Strand: Direct

Name: fnr [H]

Synonym: Bd1300

Alternate gene names: 42522822

Gene position: 1230739-1231335 (Clockwise)

Preceding gene: 42522821

Following gene: 42522824

Centisome position: 32.53

GC content: 53.77

Gene sequence:

>597_bases
ATGGAATTCAAAGATCTGTTTTCTCAAGCCGTCTCAAAAAACTTCCGCCGCGGGGACGTGGTGTATCGTGCGGGTGAAAC
ACCCCAGAATATTTATTTTGTCGAATCAGGCCTGGTGGGCCTGGGGTTGTGGGGAGAATCCGGCAAGGATCATCTGGTGC
GCTTGTTTCGCGAGGGCCAGATCTTTGGGCACCGCAGTCTGTTTGCCAATGAACCGTATCATGCCACCGCCACCGTGATT
GATGACAGTGTCCTTCGGGTCATGAATAAAAACGAAATGCGCCAGCAGATGAAAGGCAACTGTGACCTCGCGGAAAAGCT
TTTGGAGACTTTGGCGATTGAACTGCGCCGGGCTGAAGCCAAACAATTGATCTTGAGTGAAAAAGACGCCCCGGCGCGTA
TTGCCGAAGCGGTGGTGTATTTAAAAGAACTTCACCCGGAATACTCCTGGACCCGGCAAGAGATCGCCGATTTCTGCGGG
ACCACCACACCCACCGTGATCCGCACTCTGGCCCGCTTCGTGGAAGACGGGCTGATAGAGCAGCGCGGGCGGGAAATCAT
CATCCTGGATAAAAAGAACCTACTGGCGCAGGGGTAA

Upstream 100 bases:

>100_bases
ACGTAAACTAATCAGGGATCATTCCTGAAACTAAAAGCCGGGTTGGAAACAGCCCGGCTTTTTTTATGTCCAAAACCCGG
TTTTGTGATTTAATACCAGT

Downstream 100 bases:

>100_bases
TTTTAAATACCGTGTGCCATTTTCCTCCGCCGCCGGCAGCTGGCCCGCGCGGATATTCACCTGAATGCTTGGTAGAAGCA
GTTTGGGGGCCGCCAGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEFKDLFSQAVSKNFRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFREGQIFGHRSLFANEPYHATATVI
DDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRRAEAKQLILSEKDAPARIAEAVVYLKELHPEYSWTRQEIADFCG
TTTPTVIRTLARFVEDGLIEQRGREIIILDKKNLLAQG

Sequences:

>Translated_198_residues
MEFKDLFSQAVSKNFRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFREGQIFGHRSLFANEPYHATATVI
DDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRRAEAKQLILSEKDAPARIAEAVVYLKELHPEYSWTRQEIADFCG
TTTPTVIRTLARFVEDGLIEQRGREIIILDKKNLLAQG
>Mature_198_residues
MEFKDLFSQAVSKNFRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFREGQIFGHRSLFANEPYHATATVI
DDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRRAEAKQLILSEKDAPARIAEAVVYLKELHPEYSWTRQEIADFCG
TTTPTVIRTLARFVEDGLIEQRGREIIILDKKNLLAQG

Specific function: It is involved in the activation of genes necessary for anaerobic respiration [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 22541; Mature: 22541

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKDLFSQAVSKNFRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFREGQ
CCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCC
IFGHRSLFANEPYHATATVIDDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRRAEA
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KQLILSEKDAPARIAEAVVYLKELHPEYSWTRQEIADFCGTTTPTVIRTLARFVEDGLIE
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QRGREIIILDKKNLLAQG
HCCCEEEEECCHHHCCCC
>Mature Secondary Structure
MEFKDLFSQAVSKNFRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFREGQ
CCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCC
IFGHRSLFANEPYHATATVIDDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRRAEA
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KQLILSEKDAPARIAEAVVYLKELHPEYSWTRQEIADFCGTTTPTVIRTLARFVEDGLIE
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QRGREIIILDKKNLLAQG
HCCCEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8846791; 9384377 [H]