| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is ygcG [H]
Identifier: 42522742
GI number: 42522742
Start: 1147204
End: 1147959
Strand: Direct
Name: ygcG [H]
Synonym: Bd1208
Alternate gene names: 42522742
Gene position: 1147204-1147959 (Clockwise)
Preceding gene: 42522741
Following gene: 42522743
Centisome position: 30.33
GC content: 55.82
Gene sequence:
>756_bases ATGCGTTTCTTAGCATATTCTTTTTTCGCTTTCTTCTTGGCCCTGGGTGTTTCCGCCCGGGCTGAGTTTAAGGTTCCCAC GCTGACCGGTCCTGTGATGGACGAGGTCGGTTATCTTTCCCGCAACGACCGTCAAGAGCTGATGCAGCTTCTTTATGACT TCAACAAACGCGGGGTCGCTCAAGTTCAAGTTTTGATCGTTCCTACCTTGGATGGCATGCCCATCGAGATGGCGTCCATT GCTGTCACTGACAAGTGGAAGCTCGGGGACGAGAAAAAAGACAACGGGGTTTTGTTCCTGATTGCGGCCAATGATCGCAA ACTGCGTATTGAAGTCGGGCAGGGTCTTGAAGGCGCTATTCCCGATGTGATCGCCAGCCGGATCATTCGTGATCAGGTGG TGCCGTTGTTCCGCGCCCGTCAATTTTCTGCCGGGATCGTGCTGGGGACACACGAGATCTTACGTCTGGCGGATAAAGAG TTCGCAGAACAAAACGGACTGCAGGAAGGTGTTCCTGCAAAAAGTGACCGTGATGGTTCCGGCGGCGATATTCCTATTGG TGTGATCATCATTCTCTTCATCATTATTTCTATCCTGGGTCGCTTTGGTGGCGGTCGTGGACGTCATCTTCGTGGTGGCG GCTGGGGCGGTGGCTACGGTGGTGGTGGGGGATGGTCTTCCGGCGGGGGTGGCGGAGGCGGCTGGTCCGGTGGTGGCGGC GGCTTCAGCGGCGGGGGCTCATCCGGCAGTTGGTAA
Upstream 100 bases:
>100_bases ATGTATCACTTCGAAAAAATGCCTCAATGGGACATGACTCCGGAAGAAAAAGCTTCTGCTGAAAAAGCACCGGAAGTGAA GTTCTAGTTTGTCAGGGAAC
Downstream 100 bases:
>100_bases ACCAAGCTCTCGGGGCTGCGTCTTGGGGAAAGGCTCTTTGCCTTACCCGCTTCGGACAGTCCTCGCTCTTGGTTTTCTGT GGTGGCTGCCGCTGGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MRFLAYSFFAFFLALGVSARAEFKVPTLTGPVMDEVGYLSRNDRQELMQLLYDFNKRGVAQVQVLIVPTLDGMPIEMASI AVTDKWKLGDEKKDNGVLFLIAANDRKLRIEVGQGLEGAIPDVIASRIIRDQVVPLFRARQFSAGIVLGTHEILRLADKE FAEQNGLQEGVPAKSDRDGSGGDIPIGVIIILFIIISILGRFGGGRGRHLRGGGWGGGYGGGGGWSSGGGGGGGWSGGGG GFSGGGSSGSW
Sequences:
>Translated_251_residues MRFLAYSFFAFFLALGVSARAEFKVPTLTGPVMDEVGYLSRNDRQELMQLLYDFNKRGVAQVQVLIVPTLDGMPIEMASI AVTDKWKLGDEKKDNGVLFLIAANDRKLRIEVGQGLEGAIPDVIASRIIRDQVVPLFRARQFSAGIVLGTHEILRLADKE FAEQNGLQEGVPAKSDRDGSGGDIPIGVIIILFIIISILGRFGGGRGRHLRGGGWGGGYGGGGGWSSGGGGGGGWSGGGG GFSGGGSSGSW >Mature_251_residues MRFLAYSFFAFFLALGVSARAEFKVPTLTGPVMDEVGYLSRNDRQELMQLLYDFNKRGVAQVQVLIVPTLDGMPIEMASI AVTDKWKLGDEKKDNGVLFLIAANDRKLRIEVGQGLEGAIPDVIASRIIRDQVVPLFRARQFSAGIVLGTHEILRLADKE FAEQNGLQEGVPAKSDRDGSGGDIPIGVIIILFIIISILGRFGGGRGRHLRGGGWGGGYGGGGGWSSGGGGGGGWSGGGG GFSGGGSSGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=155, Percent_Identity=33.5483870967742, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 26445; Mature: 26445
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLAYSFFAFFLALGVSARAEFKVPTLTGPVMDEVGYLSRNDRQELMQLLYDFNKRGVA CCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE QVQVLIVPTLDGMPIEMASIAVTDKWKLGDEKKDNGVLFLIAANDRKLRIEVGQGLEGAI EEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCH PDVIASRIIRDQVVPLFRARQFSAGIVLGTHEILRLADKEFAEQNGLQEGVPAKSDRDGS HHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GGDIPIGVIIILFIIISILGRFGGGRGRHLRGGGWGGGYGGGGGWSSGGGGGGGWSGGGG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFSGGGSSGSW CCCCCCCCCCC >Mature Secondary Structure MRFLAYSFFAFFLALGVSARAEFKVPTLTGPVMDEVGYLSRNDRQELMQLLYDFNKRGVA CCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE QVQVLIVPTLDGMPIEMASIAVTDKWKLGDEKKDNGVLFLIAANDRKLRIEVGQGLEGAI EEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCH PDVIASRIIRDQVVPLFRARQFSAGIVLGTHEILRLADKEFAEQNGLQEGVPAKSDRDGS HHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GGDIPIGVIIILFIIISILGRFGGGRGRHLRGGGWGGGYGGGGGWSSGGGGGGGWSGGGG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFSGGGSSGSW CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]