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The map label for this gene is lemA [H]

Identifier: 42522741

GI number: 42522741

Start: 1146600

End: 1147190

Strand: Direct

Name: lemA [H]

Synonym: Bd1207

Alternate gene names: 42522741

Gene position: 1146600-1147190 (Clockwise)

Preceding gene: 42522739

Following gene: 42522742

Centisome position: 30.31

GC content: 46.53

Gene sequence:

>591_bases
ATGAAAAACCGTATTCTAGTTCTTGCTTTGATGTTGATGCCATTTTTGGCAGGTTGTGGGATTCAATCTCTTCCTCAAGC
TAAGAATGCTACTGAGGCTGCTTTGGCTGAGGTGAACAATCAATACAAACGTCGGGCTGATTTGATTCCGAATCTTGTGA
ATGTTGTTAAGGGTTATGCGAAGCATGAAGAAGCTACTTTGACGGCGGTGACAGAGGCTCGTGCCAAAGCGACCGCTATG
CAGATTGATCCTTCCAAAGTGACTCCCGAGCAACTGGCGAAATTCCAGCAGGCGCAAAGTGGTTTGTCTCAAGCTTTGGG
TCGTTTGATGGTGGTGTCAGAGCAGTATCCTCAGTTGAAAGCGGATCAGAACTTCCGTGATCTTCAGGCTCAGCTGGAAG
GCACCGAAAACCGCATCACAATTGCTCGTCAAAGATACATCGAGACTATCAATGCATTTAACAACCAAGTCAGCGTTCCG
CCGACAAGCTGGACAAATGCGATCATGTATCACTTCGAAAAAATGCCTCAATGGGACATGACTCCGGAAGAAAAAGCTTC
TGCTGAAAAAGCACCGGAAGTGAAGTTCTAG

Upstream 100 bases:

>100_bases
TTTTTGGCGGTGGCTCCGCAGAGGCTGTTTTGCCTCACTGCGGAACTCGCGTCGATGTCCAGCTATAAGTTCTAACGAAT
CTAACGGAGGCCTTGTTTTT

Downstream 100 bases:

>100_bases
TTTGTCAGGGAACATGCGTTTCTTAGCATATTCTTTTTTCGCTTTCTTCTTGGCCCTGGGTGTTTCCGCCCGGGCTGAGT
TTAAGGTTCCCACGCTGACC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKNRILVLALMLMPFLAGCGIQSLPQAKNATEAALAEVNNQYKRRADLIPNLVNVVKGYAKHEEATLTAVTEARAKATAM
QIDPSKVTPEQLAKFQQAQSGLSQALGRLMVVSEQYPQLKADQNFRDLQAQLEGTENRITIARQRYIETINAFNNQVSVP
PTSWTNAIMYHFEKMPQWDMTPEEKASAEKAPEVKF

Sequences:

>Translated_196_residues
MKNRILVLALMLMPFLAGCGIQSLPQAKNATEAALAEVNNQYKRRADLIPNLVNVVKGYAKHEEATLTAVTEARAKATAM
QIDPSKVTPEQLAKFQQAQSGLSQALGRLMVVSEQYPQLKADQNFRDLQAQLEGTENRITIARQRYIETINAFNNQVSVP
PTSWTNAIMYHFEKMPQWDMTPEEKASAEKAPEVKF
>Mature_196_residues
MKNRILVLALMLMPFLAGCGIQSLPQAKNATEAALAEVNNQYKRRADLIPNLVNVVKGYAKHEEATLTAVTEARAKATAM
QIDPSKVTPEQLAKFQQAQSGLSQALGRLMVVSEQYPQLKADQNFRDLQAQLEGTENRITIARQRYIETINAFNNQVSVP
PTSWTNAIMYHFEKMPQWDMTPEEKASAEKAPEVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21948; Mature: 21948

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRILVLALMLMPFLAGCGIQSLPQAKNATEAALAEVNNQYKRRADLIPNLVNVVKGYA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHEEATLTAVTEARAKATAMQIDPSKVTPEQLAKFQQAQSGLSQALGRLMVVSEQYPQLK
HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADQNFRDLQAQLEGTENRITIARQRYIETINAFNNQVSVPPTSWTNAIMYHFEKMPQWDM
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
TPEEKASAEKAPEVKF
CCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNRILVLALMLMPFLAGCGIQSLPQAKNATEAALAEVNNQYKRRADLIPNLVNVVKGYA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHEEATLTAVTEARAKATAMQIDPSKVTPEQLAKFQQAQSGLSQALGRLMVVSEQYPQLK
HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADQNFRDLQAQLEGTENRITIARQRYIETINAFNNQVSVPPTSWTNAIMYHFEKMPQWDM
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
TPEEKASAEKAPEVKF
CCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]