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The map label for this gene is ftsY [H]

Identifier: 42522713

GI number: 42522713

Start: 1114849

End: 1116057

Strand: Direct

Name: ftsY [H]

Synonym: Bd1173

Alternate gene names: 42522713

Gene position: 1114849-1116057 (Clockwise)

Preceding gene: 42522709

Following gene: 42522714

Centisome position: 29.47

GC content: 51.45

Gene sequence:

>1209_bases
ATGATGTCACCTGGGCATGCTCAGCAGATGGAAATTTTGGTGGGGGCTATCGTTCTTATTTTCGCGGTGATTGTCGGTGC
TCTGATCTTGGGCATGATGAAAAATGCGAAAAAACGTGAACAGCTGCGCGCACAGGAGCTTTCTCACGAAGCCAAACGCG
AGATGCCGACAACTTCTGAACAGTCAGAAGAACTTGCGCTGGCGCACATAGATTCCACGGGCAATGTGGTTTCTGATTTG
TCCGTGCCGGATCTGCATGATGCGGCGGTGGTGATTGAAGAAAAGGCCGTGGACCTGGCCGTGGCACTGAAGAAAACCGA
AGAAAATCTTTTCGGCCGTATTCGCAACCTGTTCAAATCTGAAACCAGCAACAAACATCTGGAAGAGATCGAAGAGATCC
TTTACACCAGCGATCTGGGCCCGGCGACAGTACAGCGTCTGATGGGTGCAATTGAAGACAAGCTTTCCAAAAAAGAGCGT
GCGGATTACGACACCGTTCGTGAAGCGCTGAAAGAAGAAATCAAAAACATCTTCCAGGGTTCTCATTCCACTTCGGTGGG
GACAGGCATCCTTTCCAAGATTCAGTTCGCGGCGGAAGGCCCGACAGTTCTGATGATTGTTGGTGTGAATGGGGCCGGTA
AAACCACCTCTATCGGTAAAATTTCAGCGCAACTGGCCGCTGAAGGCAAAAAGGTTCTGGTGGCGGCAGGGGATACATTC
CGTGCAGCGGCGGGTGGGCAGTTGAAGGTTTGGACCGATCGTGCTCAGGTCGAGATTTTTTCTCCGGAAGGCGTGACCGA
TCCTAGTGCCGTGGCATTTGATGCCGTAGCCAAAGGTAAAGCCCAGGGCTATGACGTGGTGATCGTGGATACAGCGGGTC
GCTTGCACACTCAAGCCAACTTGATGGAAGAAATCAAAAAGATGAAACGTGTGATGTCCAAGGTGATCCCGGAAGCTCCA
CACGAGACTCTGATCGTTTTGGATGCGAACTCGGGCCAGAATGCCTTGATGCAGGCTAAAGAATTCCATAATGCCCTGAC
TTTGACCGGAGCAGTTCTGACTAAAATGGATGGCACCGCCAAGGGGGGCGTGGCTGTGGGCCTTGCGCAAGAACTTCATA
TCCCAATCAAGTTGATCGGTGTGGGAGAGCGCATTCAGGACCTGCGCACGTTTTCTTCTCAAGAGTTCGTTAACTCTCTG
TTTCAATAG

Upstream 100 bases:

>100_bases
TTGAAACGCTGGGAAAATGCTCTGGTCTCGGCTTCTAAAATGCGGTACATAGGTTGTGTTTTCTTATCTTAATGACGCAC
ATTGTTGCGGAGGTTCATTT

Downstream 100 bases:

>100_bases
TGTGGCTCGGGGGATTGCCCCCGGGATCTGACCAATTCCTGACGGAATTCCCGGAACAATTCGGTTATAAGAAGGGCCTC
AAAACCTAAAAGGGGGCTCT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MMSPGHAQQMEILVGAIVLIFAVIVGALILGMMKNAKKREQLRAQELSHEAKREMPTTSEQSEELALAHIDSTGNVVSDL
SVPDLHDAAVVIEEKAVDLAVALKKTEENLFGRIRNLFKSETSNKHLEEIEEILYTSDLGPATVQRLMGAIEDKLSKKER
ADYDTVREALKEEIKNIFQGSHSTSVGTGILSKIQFAAEGPTVLMIVGVNGAGKTTSIGKISAQLAAEGKKVLVAAGDTF
RAAAGGQLKVWTDRAQVEIFSPEGVTDPSAVAFDAVAKGKAQGYDVVIVDTAGRLHTQANLMEEIKKMKRVMSKVIPEAP
HETLIVLDANSGQNALMQAKEFHNALTLTGAVLTKMDGTAKGGVAVGLAQELHIPIKLIGVGERIQDLRTFSSQEFVNSL
FQ

Sequences:

>Translated_402_residues
MMSPGHAQQMEILVGAIVLIFAVIVGALILGMMKNAKKREQLRAQELSHEAKREMPTTSEQSEELALAHIDSTGNVVSDL
SVPDLHDAAVVIEEKAVDLAVALKKTEENLFGRIRNLFKSETSNKHLEEIEEILYTSDLGPATVQRLMGAIEDKLSKKER
ADYDTVREALKEEIKNIFQGSHSTSVGTGILSKIQFAAEGPTVLMIVGVNGAGKTTSIGKISAQLAAEGKKVLVAAGDTF
RAAAGGQLKVWTDRAQVEIFSPEGVTDPSAVAFDAVAKGKAQGYDVVIVDTAGRLHTQANLMEEIKKMKRVMSKVIPEAP
HETLIVLDANSGQNALMQAKEFHNALTLTGAVLTKMDGTAKGGVAVGLAQELHIPIKLIGVGERIQDLRTFSSQEFVNSL
FQ
>Mature_402_residues
MMSPGHAQQMEILVGAIVLIFAVIVGALILGMMKNAKKREQLRAQELSHEAKREMPTTSEQSEELALAHIDSTGNVVSDL
SVPDLHDAAVVIEEKAVDLAVALKKTEENLFGRIRNLFKSETSNKHLEEIEEILYTSDLGPATVQRLMGAIEDKLSKKER
ADYDTVREALKEEIKNIFQGSHSTSVGTGILSKIQFAAEGPTVLMIVGVNGAGKTTSIGKISAQLAAEGKKVLVAAGDTF
RAAAGGQLKVWTDRAQVEIFSPEGVTDPSAVAFDAVAKGKAQGYDVVIVDTAGRLHTQANLMEEIKKMKRVMSKVIPEAP
HETLIVLDANSGQNALMQAKEFHNALTLTGAVLTKMDGTAKGGVAVGLAQELHIPIKLIGVGERIQDLRTFSSQEFVNSL
FQ

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=200, Percent_Identity=34, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=34, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI295424842, Length=409, Percent_Identity=27.8728606356968, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI23308697, Length=409, Percent_Identity=27.8728606356968, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.0740740740741, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI1789874, Length=304, Percent_Identity=43.75, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1788963, Length=307, Percent_Identity=33.5504885993485, Blast_Score=147, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=200, Percent_Identity=34.5, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=306, Percent_Identity=29.7385620915033, Blast_Score=101, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6325345, Length=270, Percent_Identity=34.8148148148148, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=311, Percent_Identity=28.9389067524116, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17647949, Length=200, Percent_Identity=34.5, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24641198, Length=305, Percent_Identity=27.8688524590164, Blast_Score=98, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 43242; Mature: 43242

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSPGHAQQMEILVGAIVLIFAVIVGALILGMMKNAKKREQLRAQELSHEAKREMPTTSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
QSEELALAHIDSTGNVVSDLSVPDLHDAAVVIEEKAVDLAVALKKTEENLFGRIRNLFKS
CCCCEEEEEECCCCCEECCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ETSNKHLEEIEEILYTSDLGPATVQRLMGAIEDKLSKKERADYDTVREALKEEIKNIFQG
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
SHSTSVGTGILSKIQFAAEGPTVLMIVGVNGAGKTTSIGKISAQLAAEGKKVLVAAGDTF
CCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCE
RAAAGGQLKVWTDRAQVEIFSPEGVTDPSAVAFDAVAKGKAQGYDVVIVDTAGRLHTQAN
ECCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH
LMEEIKKMKRVMSKVIPEAPHETLIVLDANSGQNALMQAKEFHNALTLTGAVLTKMDGTA
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGGVAVGLAQELHIPIKLIGVGERIQDLRTFSSQEFVNSLFQ
CCCEEEEEHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSPGHAQQMEILVGAIVLIFAVIVGALILGMMKNAKKREQLRAQELSHEAKREMPTTSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
QSEELALAHIDSTGNVVSDLSVPDLHDAAVVIEEKAVDLAVALKKTEENLFGRIRNLFKS
CCCCEEEEEECCCCCEECCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ETSNKHLEEIEEILYTSDLGPATVQRLMGAIEDKLSKKERADYDTVREALKEEIKNIFQG
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
SHSTSVGTGILSKIQFAAEGPTVLMIVGVNGAGKTTSIGKISAQLAAEGKKVLVAAGDTF
CCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCE
RAAAGGQLKVWTDRAQVEIFSPEGVTDPSAVAFDAVAKGKAQGYDVVIVDTAGRLHTQAN
ECCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH
LMEEIKKMKRVMSKVIPEAPHETLIVLDANSGQNALMQAKEFHNALTLTGAVLTKMDGTA
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGGVAVGLAQELHIPIKLIGVGERIQDLRTFSSQEFVNSLFQ
CCCEEEEEHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]