Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522707

Identifier: 42522707

GI number: 42522707

Start: 1107745

End: 1109313

Strand: Direct

Name: 42522707

Synonym: Bd1167

Alternate gene names: NA

Gene position: 1107745-1109313 (Clockwise)

Preceding gene: 42522705

Following gene: 42522708

Centisome position: 29.28

GC content: 49.27

Gene sequence:

>1569_bases
ATGTCGTTTAATTATCAAAAAAACAAAGAACATTCGAGCGACAGTTTTTGGACGTCGTATTCGGATTTATTCTTGGGTTT
AAGCACGATCTTCCTTCTTTTGTATGTCACATCCAGTTTGCGCACAGGCACCGATGCTTTGCGTGGCCAGGTGGAAAACC
AGAAGCTTTCCATGAAGGTGGAAGAACTGGAAAACCAGTTGAAGATGTACGAGAACGTGAAGAACGAATATCTGGCCAGT
CAGGCACCTAAAGACGAGGTGCAGGAGTATGAAGAGCTTATGGACAAGCTGACATTGCTTCAGGAGGACGCCAAAACTGA
AAAAGAGCGTCTGATCCAGGAAGCCCGTGAAAACGGGGAAAAGGTCAAAGCTCTGAACAAGTACCAGCAGATGGTGCGCA
ATGTTCTTAATGCCAACAAGATGGCCAAGTCCAAGCTGATCAATCGTGATGATTTGATTAAAGAGCAGGACGTGGAAATC
GAAACCCAGGAAACCGAAATTGCTGATCTGAATAAAGACATTCAGAACAAAAAGCAGTTGATCGCCCAGGGTGAACAGAA
GATCGCGGTCACACAGGCTCAGTTGCAAAAACGTCTGACCGAGCTGCGTGTGGCCTACAAGAACAACAAGCTGTCCAAAC
AGTTGTTTGAACAGAAAATGGCGCAAGCCCGCGCTGAGGGAAATCAAAAGGTGGCCCAGCTGAATCAGGTCAATGCCCAA
TATCAAATGCAACTGAACCAGGCCAATGTGCAATTGGGTCAGGTGCAGGGCGAACTTTCCAAAACTCAGGGGTTGCTGGC
GCAGAAGGAAGACGAAGCAACTCATCTGGCGGGCGCGTTGTCCCGCACCAAGGCTGAGGCCGGTGCGAAAATCGCAGGAT
TGCAACAGGGCTTTGCGGAAGAAAAAGCGGCTTTGGCGGCAGGCTTTGGCAAGGAAAAGGCAAAGTTGCAGGGTGCTTTG
AGCGACACGCAAGGGCAGTTGGCGAAAGCACGTGCTGAAATTGAAGCGCGTAAATCCGTGGCGGGTGAGATTCAAAAAGG
TTTCGCCAAGGCAGGGATCAAAGCTGACATTGATATGCAGACGGGCGACGTGGTTCTGGATTTCGGACAGGCTTACTTTG
ACAGTGACTCCGACCGCCTGAAACACGAGATGAAAGGTGTCCTTGAAAAAGCGATGCCGATTTATTCGCGCTCTTTGTTC
GGCAACCCAAAGGTGTCGGATAAAATTTCCGCGGTGGAGATCATCGGTTTTGCGTCACCAACATATCAGGGCCGTTTCGT
CGATCCGCACAGTTCCAAGCCGGCGGACAAAGCCGCTTTGAAGTACAACATGGATCTAAGCTATCGCCGTGCGAATTCCA
TCTTCAGTTACATGCTGGATGAAGGAAACATGAGATTTGAACATCAACGCGAACTATTGGCCCTTATGAAGGTTTCCGGA
CGAAGCTTCCTGGAAGTCATGAAGGTGCAAAATCGCAACGTCGCCACAGCAGCCGAATTCTGCAAGCAGAACGACTGTAA
GAAGGCGCAGCGGGTAATCATCCGCTTTAACATGGATCCGAAGAAATAA

Upstream 100 bases:

>100_bases
CTTCGGCATTTTCTCCGAAAGAAAAACACTCAATTCTGTTTTTGAGCCACCGAAAAGAAGATCGTCACTGTTATGATTTG
TGCAGGTGGGGTGCGTTGGT

Downstream 100 bases:

>100_bases
AAGGGGTGGGTTGTGACAACGAAGGCATTTGCTGAATATTTTATTATAAGTCTGCCGTATGTGATGGGCGCCGTCTTTCT
GGTCGGTTTGTTCTTCCGCG

Product: microtubule binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSFNYQKNKEHSSDSFWTSYSDLFLGLSTIFLLLYVTSSLRTGTDALRGQVENQKLSMKVEELENQLKMYENVKNEYLAS
QAPKDEVQEYEELMDKLTLLQEDAKTEKERLIQEARENGEKVKALNKYQQMVRNVLNANKMAKSKLINRDDLIKEQDVEI
ETQETEIADLNKDIQNKKQLIAQGEQKIAVTQAQLQKRLTELRVAYKNNKLSKQLFEQKMAQARAEGNQKVAQLNQVNAQ
YQMQLNQANVQLGQVQGELSKTQGLLAQKEDEATHLAGALSRTKAEAGAKIAGLQQGFAEEKAALAAGFGKEKAKLQGAL
SDTQGQLAKARAEIEARKSVAGEIQKGFAKAGIKADIDMQTGDVVLDFGQAYFDSDSDRLKHEMKGVLEKAMPIYSRSLF
GNPKVSDKISAVEIIGFASPTYQGRFVDPHSSKPADKAALKYNMDLSYRRANSIFSYMLDEGNMRFEHQRELLALMKVSG
RSFLEVMKVQNRNVATAAEFCKQNDCKKAQRVIIRFNMDPKK

Sequences:

>Translated_522_residues
MSFNYQKNKEHSSDSFWTSYSDLFLGLSTIFLLLYVTSSLRTGTDALRGQVENQKLSMKVEELENQLKMYENVKNEYLAS
QAPKDEVQEYEELMDKLTLLQEDAKTEKERLIQEARENGEKVKALNKYQQMVRNVLNANKMAKSKLINRDDLIKEQDVEI
ETQETEIADLNKDIQNKKQLIAQGEQKIAVTQAQLQKRLTELRVAYKNNKLSKQLFEQKMAQARAEGNQKVAQLNQVNAQ
YQMQLNQANVQLGQVQGELSKTQGLLAQKEDEATHLAGALSRTKAEAGAKIAGLQQGFAEEKAALAAGFGKEKAKLQGAL
SDTQGQLAKARAEIEARKSVAGEIQKGFAKAGIKADIDMQTGDVVLDFGQAYFDSDSDRLKHEMKGVLEKAMPIYSRSLF
GNPKVSDKISAVEIIGFASPTYQGRFVDPHSSKPADKAALKYNMDLSYRRANSIFSYMLDEGNMRFEHQRELLALMKVSG
RSFLEVMKVQNRNVATAAEFCKQNDCKKAQRVIIRFNMDPKK
>Mature_521_residues
SFNYQKNKEHSSDSFWTSYSDLFLGLSTIFLLLYVTSSLRTGTDALRGQVENQKLSMKVEELENQLKMYENVKNEYLASQ
APKDEVQEYEELMDKLTLLQEDAKTEKERLIQEARENGEKVKALNKYQQMVRNVLNANKMAKSKLINRDDLIKEQDVEIE
TQETEIADLNKDIQNKKQLIAQGEQKIAVTQAQLQKRLTELRVAYKNNKLSKQLFEQKMAQARAEGNQKVAQLNQVNAQY
QMQLNQANVQLGQVQGELSKTQGLLAQKEDEATHLAGALSRTKAEAGAKIAGLQQGFAEEKAALAAGFGKEKAKLQGALS
DTQGQLAKARAEIEARKSVAGEIQKGFAKAGIKADIDMQTGDVVLDFGQAYFDSDSDRLKHEMKGVLEKAMPIYSRSLFG
NPKVSDKISAVEIIGFASPTYQGRFVDPHSSKPADKAALKYNMDLSYRRANSIFSYMLDEGNMRFEHQRELLALMKVSGR
SFLEVMKVQNRNVATAAEFCKQNDCKKAQRVIIRFNMDPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58829; Mature: 58698

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNYQKNKEHSSDSFWTSYSDLFLGLSTIFLLLYVTSSLRTGTDALRGQVENQKLSMKV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHH
EELENQLKMYENVKNEYLASQAPKDEVQEYEELMDKLTLLQEDAKTEKERLIQEARENGE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
KVKALNKYQQMVRNVLNANKMAKSKLINRDDLIKEQDVEIETQETEIADLNKDIQNKKQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHH
IAQGEQKIAVTQAQLQKRLTELRVAYKNNKLSKQLFEQKMAQARAEGNQKVAQLNQVNAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
YQMQLNQANVQLGQVQGELSKTQGLLAQKEDEATHLAGALSRTKAEAGAKIAGLQQGFAE
HHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EKAALAAGFGKEKAKLQGALSDTQGQLAKARAEIEARKSVAGEIQKGFAKAGIKADIDMQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
TGDVVLDFGQAYFDSDSDRLKHEMKGVLEKAMPIYSRSLFGNPKVSDKISAVEIIGFASP
CCCEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCC
TYQGRFVDPHSSKPADKAALKYNMDLSYRRANSIFSYMLDEGNMRFEHQRELLALMKVSG
CCCCCEECCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
RSFLEVMKVQNRNVATAAEFCKQNDCKKAQRVIIRFNMDPKK
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHEEEEEECCCCCC
>Mature Secondary Structure 
SFNYQKNKEHSSDSFWTSYSDLFLGLSTIFLLLYVTSSLRTGTDALRGQVENQKLSMKV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHH
EELENQLKMYENVKNEYLASQAPKDEVQEYEELMDKLTLLQEDAKTEKERLIQEARENGE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
KVKALNKYQQMVRNVLNANKMAKSKLINRDDLIKEQDVEIETQETEIADLNKDIQNKKQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHH
IAQGEQKIAVTQAQLQKRLTELRVAYKNNKLSKQLFEQKMAQARAEGNQKVAQLNQVNAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
YQMQLNQANVQLGQVQGELSKTQGLLAQKEDEATHLAGALSRTKAEAGAKIAGLQQGFAE
HHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EKAALAAGFGKEKAKLQGALSDTQGQLAKARAEIEARKSVAGEIQKGFAKAGIKADIDMQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
TGDVVLDFGQAYFDSDSDRLKHEMKGVLEKAMPIYSRSLFGNPKVSDKISAVEIIGFASP
CCCEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCC
TYQGRFVDPHSSKPADKAALKYNMDLSYRRANSIFSYMLDEGNMRFEHQRELLALMKVSG
CCCCCEECCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
RSFLEVMKVQNRNVATAAEFCKQNDCKKAQRVIIRFNMDPKK
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA