| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522705
Identifier: 42522705
GI number: 42522705
Start: 1106881
End: 1107435
Strand: Direct
Name: 42522705
Synonym: Bd1164
Alternate gene names: NA
Gene position: 1106881-1107435 (Clockwise)
Preceding gene: 42522704
Following gene: 42522707
Centisome position: 29.26
GC content: 48.65
Gene sequence:
>555_bases ATGAAGTCCGTCTATCCTGCCGAAGAAATTCGCGCCGAACGAATCACTCTGAAAAAACACAAAATTGAAATGGCTGAAAC CATGTTTCAGTATGTCGACCAGGACCGCGAACGCCTGGGGCGCTTTCTGCCATGGGTGCCATTAATCGGTGGAGTTCACG ATGAACGTGATTACATCGAAATGACTCAAGCGCAGTGGCAGGATTTCAAAATGTTCGACTATGGCATGTACCTGAACGAA GGTGACATCTATATGGGGAACGTCGGCGTGCACACGATCAGCTGGGACAATGACCGCTGTGAACTGGGCTACTGGATCCT TGGGAAATTCGAGGGACAAGGTTATGTGCGCGAGGCGGTGCTGGCTTTGGAAAAGGTCCTGTTTGAGCTTGGATTTTATC GAATTGAGATTCATTGTTCAGGTCTTAACAGCCGCAGCAGCTCTGTAGCTGAAAATTGTCATTACAAATTCGAGGCCCGT TTACGACATCACGCCGTTGAAAACGGCCAAAGACGAGACACTCTGGTGTTCGCCAAACTTCGTGATGAACGATAA
Upstream 100 bases:
>100_bases TGAAAAAGCTGATGTGCGAGCTGGTGGATGGCATTGAGAACAACTCTATGGATTATCTGGGCGGGATCCGTTTGTCTGAT CTGACGTCCAAAATCGCCAA
Downstream 100 bases:
>100_bases AAATCGCGAAATCGAAGAACTTCATCGCAATGCTTGCGAGTCCGGAAAGGACTCCTATGTCGATCCTGCGACAGGATACA CTGTTTTTACTGAGTATTTT
Product: putative ribosomal protein N-acetyltransferase
Products: NA
Alternate protein names: Ribosomal-Protein-Serine Acetyltransferase; Ribosomal Protein N-Acetyltransferase; Acetyltransferase; Acetyltransferase GNAT Family; Ribosomal-Protein-Serine N-Acetyltransferase; Microcin Immunity Protein; GNAT Family Acetyltransferase; Acetyltransferase Family Protein; Serine N-Acetyltransferase; Ribosomal Protein Acetylating; GCN5-Like N-Acetyltransferase; Ribosomal Protein N-Acetylase; Acetyltransferase-Like; Ribosomal-Protein-L7p-Serine Acetyltransferase; GCN5-Related N-Acetyltransferase Family Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKSVYPAEEIRAERITLKKHKIEMAETMFQYVDQDRERLGRFLPWVPLIGGVHDERDYIEMTQAQWQDFKMFDYGMYLNE GDIYMGNVGVHTISWDNDRCELGYWILGKFEGQGYVREAVLALEKVLFELGFYRIEIHCSGLNSRSSSVAENCHYKFEAR LRHHAVENGQRRDTLVFAKLRDER
Sequences:
>Translated_184_residues MKSVYPAEEIRAERITLKKHKIEMAETMFQYVDQDRERLGRFLPWVPLIGGVHDERDYIEMTQAQWQDFKMFDYGMYLNE GDIYMGNVGVHTISWDNDRCELGYWILGKFEGQGYVREAVLALEKVLFELGFYRIEIHCSGLNSRSSSVAENCHYKFEAR LRHHAVENGQRRDTLVFAKLRDER >Mature_184_residues MKSVYPAEEIRAERITLKKHKIEMAETMFQYVDQDRERLGRFLPWVPLIGGVHDERDYIEMTQAQWQDFKMFDYGMYLNE GDIYMGNVGVHTISWDNDRCELGYWILGKFEGQGYVREAVLALEKVLFELGFYRIEIHCSGLNSRSSSVAENCHYKFEAR LRHHAVENGQRRDTLVFAKLRDER
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21795; Mature: 21795
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVYPAEEIRAERITLKKHKIEMAETMFQYVDQDRERLGRFLPWVPLIGGVHDERDYIE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHH MTQAQWQDFKMFDYGMYLNEGDIYMGNVGVHTISWDNDRCELGYWILGKFEGQGYVREAV HHHHHHCCCEEEEEEEEEECCCEEECCCEEEEEECCCCCEEEEEEEEEEECCCCHHHHHH LALEKVLFELGFYRIEIHCSGLNSRSSSVAENCHYKFEARLRHHAVENGQRRDTLVFAKL HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEE RDER CCCC >Mature Secondary Structure MKSVYPAEEIRAERITLKKHKIEMAETMFQYVDQDRERLGRFLPWVPLIGGVHDERDYIE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHH MTQAQWQDFKMFDYGMYLNEGDIYMGNVGVHTISWDNDRCELGYWILGKFEGQGYVREAV HHHHHHCCCEEEEEEEEEECCCEEECCCEEEEEECCCCCEEEEEEEEEEECCCCHHHHHH LALEKVLFELGFYRIEIHCSGLNSRSSSVAENCHYKFEARLRHHAVENGQRRDTLVFAKL HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEE RDER CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA