Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522700

Identifier: 42522700

GI number: 42522700

Start: 1101531

End: 1103078

Strand: Direct

Name: 42522700

Synonym: Bd1159

Alternate gene names: NA

Gene position: 1101531-1103078 (Clockwise)

Preceding gene: 42522699

Following gene: 42522701

Centisome position: 29.12

GC content: 52.0

Gene sequence:

>1548_bases
ATGACCGTGACCAAGTTAATCTTTGCATTCACGTTGCTGATGGCACCGTTTGCTTCTGCTCAAGTTTTGAGTGAAGCAGG
CTTGTTCAATCGTTGCTACTCCCATTTGACCGGGAAACCGGTGCCTTTGGGGCACGCAACGATGGCGCAGATCCGTGCCG
GTAAAATCAAGGCGCTGGACGCCTGTAATTCTTTGTTGGACAAGGCCGAACTGGATGCTTCCGGTCCGTTGGTCAATCGT
TCTGACAAAGAAGCCCGCGCCGTTCTAAACACCTTCTATAATTTCCACCGCACCTGGTTCACCGCCAACACGGTTGAACA
AATCCAGGAATACAATGAAGAGATGTCCCGCGGGACGATGGATATTTATGACTCGACAGAGCCTGGTCTGGCGCTGACAC
GTGCGATGTTTGCCCGCAATGCCCAGTACCGTGATGTTCTGACTCTGGGGCAGGGGGTGCGTGCCCAGCGTGAAGAGGAC
ATGGCCGTGCGCAATCGCATCGGCTTTAATGTGACTTTCCCGGGCCGTCGTATTTCCGGTAACAACGCAGGCTTGGACCT
GAATCTTTTCAACTTCCGTGCACTCTCTGGCGGGTTCAATGGCAATTCGGACACAACCCAAGCGATGTTTGTGACATTGC
CAAAAATTGAAGTGGGGGAGCTGGTCGGTGTGCGCATCGCCACAGATAATGCGACCATTCCGAATCTGTCATTGCAGCCT
TTGGGGGCTGATAAGCGCGGCAGCGACCAGCCGGGTTTGAATTTCAGTTTCAATCTTTTCCAGACTCAAGGTGGCGGTGT
GCTGGGTACACCTATTTATCTGATGCTGAACTATGGTCATGGCCGTGGTCTTGAGGCCAATGGAACCACCAAGGTTCCGC
GCCGCTGGTCTCAGACCAACATGGAATCTTTCTTGTGTGCAGAGCTTCCGGCTTTGCGTGAAAACGACATTCGTCAGTAT
GTGGTGGGGAATTCTTCTGCGCCATTTAGAAACTCCAGCAGCTGCGTGATGTGCCATGCGACTTTGGATCCGATGGCTTA
CACCGCCCGTAACGTGGTGGTCGGAAATTCTGACTATGCGGCGTTGAGTGCTGGCAGCAGAACTCACTCTAAAACGGCAT
TGCATTTGGCGACCTATCGCCCGGATTTTCCTTCTGTGGCCGGCTGGCCTTCGGAGCCGGTGGCAAACTTCCATCGTCAG
GTGCCTTCAGGTCGTCTGTTCTTCCGCTCAATGACCGGAGCTTTGATTGATCGTCCGGTGACGGGCATTGCCCAGTTGGG
TGCGGCGATGGCTGAAACCAAGGATTACTATTACTGCGCGGCTAAAAGATACTTTGAATATTTCACCGGAATCACAGTGG
CTCTTTATGACCGCTCCAATCCGGCAAATGAAGAATTAAATAAGAAACTATCCACTGAAAGCTATGAAGACCGTAAGTTC
GTTGAGGCTCTTGGGGAAGAGCTTCAGCGCAACCAGTCTGTGCGCCATATGGTGAAGCAGATCATGTCTTCAAAATACTA
TCGTGACGTGAACTATCGGGAAAAATAA

Upstream 100 bases:

>100_bases
AGTCTAAACAGCAAAGGAACGCCCCATTGTGAGAACTACAGTCGCGTTCCCGACAAAAGCTCCGATAAGATAAGGGAACT
AACGGAACTTCTTTGGGGGA

Downstream 100 bases:

>100_bases
TCCGGGGGCATTATGGGGGACGGAAAAAATCTGACTCGCAGGGGCTTTATCGCAGGTGGTGCGGTGGCCGGGGCAGCGGC
CCTGGTGGCAACACCATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MTVTKLIFAFTLLMAPFASAQVLSEAGLFNRCYSHLTGKPVPLGHATMAQIRAGKIKALDACNSLLDKAELDASGPLVNR
SDKEARAVLNTFYNFHRTWFTANTVEQIQEYNEEMSRGTMDIYDSTEPGLALTRAMFARNAQYRDVLTLGQGVRAQREED
MAVRNRIGFNVTFPGRRISGNNAGLDLNLFNFRALSGGFNGNSDTTQAMFVTLPKIEVGELVGVRIATDNATIPNLSLQP
LGADKRGSDQPGLNFSFNLFQTQGGGVLGTPIYLMLNYGHGRGLEANGTTKVPRRWSQTNMESFLCAELPALRENDIRQY
VVGNSSAPFRNSSSCVMCHATLDPMAYTARNVVVGNSDYAALSAGSRTHSKTALHLATYRPDFPSVAGWPSEPVANFHRQ
VPSGRLFFRSMTGALIDRPVTGIAQLGAAMAETKDYYYCAAKRYFEYFTGITVALYDRSNPANEELNKKLSTESYEDRKF
VEALGEELQRNQSVRHMVKQIMSSKYYRDVNYREK

Sequences:

>Translated_515_residues
MTVTKLIFAFTLLMAPFASAQVLSEAGLFNRCYSHLTGKPVPLGHATMAQIRAGKIKALDACNSLLDKAELDASGPLVNR
SDKEARAVLNTFYNFHRTWFTANTVEQIQEYNEEMSRGTMDIYDSTEPGLALTRAMFARNAQYRDVLTLGQGVRAQREED
MAVRNRIGFNVTFPGRRISGNNAGLDLNLFNFRALSGGFNGNSDTTQAMFVTLPKIEVGELVGVRIATDNATIPNLSLQP
LGADKRGSDQPGLNFSFNLFQTQGGGVLGTPIYLMLNYGHGRGLEANGTTKVPRRWSQTNMESFLCAELPALRENDIRQY
VVGNSSAPFRNSSSCVMCHATLDPMAYTARNVVVGNSDYAALSAGSRTHSKTALHLATYRPDFPSVAGWPSEPVANFHRQ
VPSGRLFFRSMTGALIDRPVTGIAQLGAAMAETKDYYYCAAKRYFEYFTGITVALYDRSNPANEELNKKLSTESYEDRKF
VEALGEELQRNQSVRHMVKQIMSSKYYRDVNYREK
>Mature_514_residues
TVTKLIFAFTLLMAPFASAQVLSEAGLFNRCYSHLTGKPVPLGHATMAQIRAGKIKALDACNSLLDKAELDASGPLVNRS
DKEARAVLNTFYNFHRTWFTANTVEQIQEYNEEMSRGTMDIYDSTEPGLALTRAMFARNAQYRDVLTLGQGVRAQREEDM
AVRNRIGFNVTFPGRRISGNNAGLDLNLFNFRALSGGFNGNSDTTQAMFVTLPKIEVGELVGVRIATDNATIPNLSLQPL
GADKRGSDQPGLNFSFNLFQTQGGGVLGTPIYLMLNYGHGRGLEANGTTKVPRRWSQTNMESFLCAELPALRENDIRQYV
VGNSSAPFRNSSSCVMCHATLDPMAYTARNVVVGNSDYAALSAGSRTHSKTALHLATYRPDFPSVAGWPSEPVANFHRQV
PSGRLFFRSMTGALIDRPVTGIAQLGAAMAETKDYYYCAAKRYFEYFTGITVALYDRSNPANEELNKKLSTESYEDRKFV
EALGEELQRNQSVRHMVKQIMSSKYYRDVNYREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57132; Mature: 57001

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTKLIFAFTLLMAPFASAQVLSEAGLFNRCYSHLTGKPVPLGHATMAQIRAGKIKALD
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHH
ACNSLLDKAELDASGPLVNRSDKEARAVLNTFYNFHRTWFTANTVEQIQEYNEEMSRGTM
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCE
DIYDSTEPGLALTRAMFARNAQYRDVLTLGQGVRAQREEDMAVRNRIGFNVTFPGRRISG
EECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCEECC
NNAGLDLNLFNFRALSGGFNGNSDTTQAMFVTLPKIEVGELVGVRIATDNATIPNLSLQP
CCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCEECCCEEEEEEEECCCCCCCCEECC
LGADKRGSDQPGLNFSFNLFQTQGGGVLGTPIYLMLNYGHGRGLEANGTTKVPRRWSQTN
CCCCCCCCCCCCCCEEEEEEEECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
MESFLCAELPALRENDIRQYVVGNSSAPFRNSSSCVMCHATLDPMAYTARNVVVGNSDYA
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHCEEEECCCCCE
ALSAGSRTHSKTALHLATYRPDFPSVAGWPSEPVANFHRQVPSGRLFFRSMTGALIDRPV
EECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCH
TGIAQLGAAMAETKDYYYCAAKRYFEYFTGITVALYDRSNPANEELNKKLSTESYEDRKF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHH
VEALGEELQRNQSVRHMVKQIMSSKYYRDVNYREK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVTKLIFAFTLLMAPFASAQVLSEAGLFNRCYSHLTGKPVPLGHATMAQIRAGKIKALD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHH
ACNSLLDKAELDASGPLVNRSDKEARAVLNTFYNFHRTWFTANTVEQIQEYNEEMSRGTM
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCE
DIYDSTEPGLALTRAMFARNAQYRDVLTLGQGVRAQREEDMAVRNRIGFNVTFPGRRISG
EECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCEECC
NNAGLDLNLFNFRALSGGFNGNSDTTQAMFVTLPKIEVGELVGVRIATDNATIPNLSLQP
CCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCEECCCEEEEEEEECCCCCCCCEECC
LGADKRGSDQPGLNFSFNLFQTQGGGVLGTPIYLMLNYGHGRGLEANGTTKVPRRWSQTN
CCCCCCCCCCCCCCEEEEEEEECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
MESFLCAELPALRENDIRQYVVGNSSAPFRNSSSCVMCHATLDPMAYTARNVVVGNSDYA
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHCEEEECCCCCE
ALSAGSRTHSKTALHLATYRPDFPSVAGWPSEPVANFHRQVPSGRLFFRSMTGALIDRPV
EECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCH
TGIAQLGAAMAETKDYYYCAAKRYFEYFTGITVALYDRSNPANEELNKKLSTESYEDRKF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHH
VEALGEELQRNQSVRHMVKQIMSSKYYRDVNYREK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA