Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522701

Identifier: 42522701

GI number: 42522701

Start: 1103091

End: 1104776

Strand: Direct

Name: 42522701

Synonym: Bd1160

Alternate gene names: NA

Gene position: 1103091-1104776 (Clockwise)

Preceding gene: 42522700

Following gene: 42522702

Centisome position: 29.16

GC content: 53.08

Gene sequence:

>1686_bases
ATGGGGGACGGAAAAAATCTGACTCGCAGGGGCTTTATCGCAGGTGGTGCGGTGGCCGGGGCAGCGGCCCTGGTGGCAAC
ACCATATGAAAGACTTCTGAATGCTCTTAGCACAGGCTTTATTCATCAAGCCCAGGCTGAAGCAACCGGAAATCTGGGAG
CTCGCAACTATATCAATATTCTGATTGCCGGTGGGCCGATGCGCTACACGTTTGATGCGTGGATGCGTACGAATCCTTCA
GATGCGCCTTTGGAATACAATCCCATGGTGGCAACGAAACTGGTTCGTTCAGGCAACAACATTGTCGGCACTGAATACGC
GACGTTCAACTATAACGGCGTGATGGTGCCACACATGTTTTCACAATCTGTGACGACATCTGCGGGTGCCAAAGCTTTGA
CGGAGCTTCTGAATAATATGCTGGTGATCCGTGGCTTCGGCTCCGGTTTTGACGGTCATCCTTTCAATGCGACAATTCAA
CAGGCTCCGGTGGGCGGTGTGTCCTCGGTGATGGGTTTGGCTGCCGACTATTCCAAGAAAACCTTTGAGGCGGTGGAGTG
GCCCGATCGTGGAGCTTACGGCAACTATGCTTCCATGAGTGGCAAAGCACTGAATATTCTGACGGGCAATCCACTGAATT
CTTTGTTGGAGGGGTTTGGCGGTCCAGCCGCAGACCGTGCCAAGGGGCGCAGCCTGAAAGACCGCAACCGTGAGGCTTTT
GATCTGGCTCAGGCACGCTTGCGTGCCTATTCGCAGTCTGAATTTGCGGGTTCGACAATTCTTTCCAAAAATCTTTCCAA
TGCCTCAGATCTGATGAAAAAAGGCATTGGGAATATCGGTTCTTACTGGGACGGGGCCGTGGCCCGTTATCGGTCCGTGA
TTGAGGCCAGCATGCGCCAGCAGGGGCTTGTGGGCATTAATGACGTGGCGATGATTTCTGACCAGGGGAACTTCTGGCGG
GTTCACGTCGCTGCGGGCAACCGCGGTCTGGTGGTCAGTCGTGATTCGGATCTGCGTGATTCCATCAAAACTATGACGGC
TCCCGGTTCATTGGCAGAAGGTTTGGCATTGGCTGAATACGTTCTGAAAGAAGGCCTGGTCAGCACGATGAATCTGCAAA
TGGGTGATCCGGCAGGTTTGATGATTAAGGATGCCGCAGATGGTGTGGTTGGAAATCACGTGGCTATCAAAGACATGCAC
GAAACCGGTGCGATTCCGGGCGTGCTGATCACGACGGCATACTATCGAGGCCTGTGTGCGGGAATGATGGAGCTGATCGA
ACAATTGAAAAAAACCAAAGTCAACGGTGTGGACCTGTGGTCTGAAACCGTGATTCAGGTGATCTCTGAATTCAACCGCA
CGGCAAGAACCAACGGTACAGGCAGTGACCATGGTTTCAATCAGATGGTGACCAGTGTGTTCTCGGGCGCAATCCAGCGC
GGTCCATTTGTTGTGGGTAACATCTATCGTGCTGGTCACGGTGGCGGTTACGTCGGCACTCAGGGACGTGCGGCACCGAT
AGATGGTTACAATCAAAAAGGCATGCCGTCCCCGACGATGGCAGCATCCACAGTGACAGCACTTTTGCGAGTTCCAAAAA
ATCCATACGAGAATCTGGCTGAACCACTGATTCGCCTGAATGGCGATCAGCTGCAGATTCTTAAAGCGGCGAAGCTGGTG
GGGTAA

Upstream 100 bases:

>100_bases
GCTTCAGCGCAACCAGTCTGTGCGCCATATGGTGAAGCAGATCATGTCTTCAAAATACTATCGTGACGTGAACTATCGGG
AAAAATAATCCGGGGGCATT

Downstream 100 bases:

>100_bases
GAACAATGATCACAGCCAAGAATAAATTTTTTATGTTGCTGTTATCCGGAGCTGTTCTGACTCAGATGTACCAAAACTGT
GGTCAGATGGGCGAGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MGDGKNLTRRGFIAGGAVAGAAALVATPYERLLNALSTGFIHQAQAEATGNLGARNYINILIAGGPMRYTFDAWMRTNPS
DAPLEYNPMVATKLVRSGNNIVGTEYATFNYNGVMVPHMFSQSVTTSAGAKALTELLNNMLVIRGFGSGFDGHPFNATIQ
QAPVGGVSSVMGLAADYSKKTFEAVEWPDRGAYGNYASMSGKALNILTGNPLNSLLEGFGGPAADRAKGRSLKDRNREAF
DLAQARLRAYSQSEFAGSTILSKNLSNASDLMKKGIGNIGSYWDGAVARYRSVIEASMRQQGLVGINDVAMISDQGNFWR
VHVAAGNRGLVVSRDSDLRDSIKTMTAPGSLAEGLALAEYVLKEGLVSTMNLQMGDPAGLMIKDAADGVVGNHVAIKDMH
ETGAIPGVLITTAYYRGLCAGMMELIEQLKKTKVNGVDLWSETVIQVISEFNRTARTNGTGSDHGFNQMVTSVFSGAIQR
GPFVVGNIYRAGHGGGYVGTQGRAAPIDGYNQKGMPSPTMAASTVTALLRVPKNPYENLAEPLIRLNGDQLQILKAAKLV
G

Sequences:

>Translated_561_residues
MGDGKNLTRRGFIAGGAVAGAAALVATPYERLLNALSTGFIHQAQAEATGNLGARNYINILIAGGPMRYTFDAWMRTNPS
DAPLEYNPMVATKLVRSGNNIVGTEYATFNYNGVMVPHMFSQSVTTSAGAKALTELLNNMLVIRGFGSGFDGHPFNATIQ
QAPVGGVSSVMGLAADYSKKTFEAVEWPDRGAYGNYASMSGKALNILTGNPLNSLLEGFGGPAADRAKGRSLKDRNREAF
DLAQARLRAYSQSEFAGSTILSKNLSNASDLMKKGIGNIGSYWDGAVARYRSVIEASMRQQGLVGINDVAMISDQGNFWR
VHVAAGNRGLVVSRDSDLRDSIKTMTAPGSLAEGLALAEYVLKEGLVSTMNLQMGDPAGLMIKDAADGVVGNHVAIKDMH
ETGAIPGVLITTAYYRGLCAGMMELIEQLKKTKVNGVDLWSETVIQVISEFNRTARTNGTGSDHGFNQMVTSVFSGAIQR
GPFVVGNIYRAGHGGGYVGTQGRAAPIDGYNQKGMPSPTMAASTVTALLRVPKNPYENLAEPLIRLNGDQLQILKAAKLV
G
>Mature_560_residues
GDGKNLTRRGFIAGGAVAGAAALVATPYERLLNALSTGFIHQAQAEATGNLGARNYINILIAGGPMRYTFDAWMRTNPSD
APLEYNPMVATKLVRSGNNIVGTEYATFNYNGVMVPHMFSQSVTTSAGAKALTELLNNMLVIRGFGSGFDGHPFNATIQQ
APVGGVSSVMGLAADYSKKTFEAVEWPDRGAYGNYASMSGKALNILTGNPLNSLLEGFGGPAADRAKGRSLKDRNREAFD
LAQARLRAYSQSEFAGSTILSKNLSNASDLMKKGIGNIGSYWDGAVARYRSVIEASMRQQGLVGINDVAMISDQGNFWRV
HVAAGNRGLVVSRDSDLRDSIKTMTAPGSLAEGLALAEYVLKEGLVSTMNLQMGDPAGLMIKDAADGVVGNHVAIKDMHE
TGAIPGVLITTAYYRGLCAGMMELIEQLKKTKVNGVDLWSETVIQVISEFNRTARTNGTGSDHGFNQMVTSVFSGAIQRG
PFVVGNIYRAGHGGGYVGTQGRAAPIDGYNQKGMPSPTMAASTVTALLRVPKNPYENLAEPLIRLNGDQLQILKAAKLVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59536; Mature: 59404

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGKNLTRRGFIAGGAVAGAAALVATPYERLLNALSTGFIHQAQAEATGNLGARNYINI
CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
LIAGGPMRYTFDAWMRTNPSDAPLEYNPMVATKLVRSGNNIVGTEYATFNYNGVMVPHMF
EEECCCCEEEEHHHHCCCCCCCCEECCCHHHHHHHHCCCCEEECEEEEEECCCEECCHHH
SQSVTTSAGAKALTELLNNMLVIRGFGSGFDGHPFNATIQQAPVGGVSSVMGLAADYSKK
HHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHH
TFEAVEWPDRGAYGNYASMSGKALNILTGNPLNSLLEGFGGPAADRAKGRSLKDRNREAF
HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHCCCCCHHCCCHHH
DLAQARLRAYSQSEFAGSTILSKNLSNASDLMKKGIGNIGSYWDGAVARYRSVIEASMRQ
HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QGLVGINDVAMISDQGNFWRVHVAAGNRGLVVSRDSDLRDSIKTMTAPGSLAEGLALAEY
CCCCCCCCEEEEECCCCEEEEEEEECCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
VLKEGLVSTMNLQMGDPAGLMIKDAADGVVGNHVAIKDMHETGAIPGVLITTAYYRGLCA
HHHHCCHHHEEEECCCCCCEEEECCCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHHHHH
GMMELIEQLKKTKVNGVDLWSETVIQVISEFNRTARTNGTGSDHGFNQMVTSVFSGAIQR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
GPFVVGNIYRAGHGGGYVGTQGRAAPIDGYNQKGMPSPTMAASTVTALLRVPKNPYENLA
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
EPLIRLNGDQLQILKAAKLVG
HHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GDGKNLTRRGFIAGGAVAGAAALVATPYERLLNALSTGFIHQAQAEATGNLGARNYINI
CCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
LIAGGPMRYTFDAWMRTNPSDAPLEYNPMVATKLVRSGNNIVGTEYATFNYNGVMVPHMF
EEECCCCEEEEHHHHCCCCCCCCEECCCHHHHHHHHCCCCEEECEEEEEECCCEECCHHH
SQSVTTSAGAKALTELLNNMLVIRGFGSGFDGHPFNATIQQAPVGGVSSVMGLAADYSKK
HHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHH
TFEAVEWPDRGAYGNYASMSGKALNILTGNPLNSLLEGFGGPAADRAKGRSLKDRNREAF
HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHCCCCCHHCCCHHH
DLAQARLRAYSQSEFAGSTILSKNLSNASDLMKKGIGNIGSYWDGAVARYRSVIEASMRQ
HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QGLVGINDVAMISDQGNFWRVHVAAGNRGLVVSRDSDLRDSIKTMTAPGSLAEGLALAEY
CCCCCCCCEEEEECCCCEEEEEEEECCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
VLKEGLVSTMNLQMGDPAGLMIKDAADGVVGNHVAIKDMHETGAIPGVLITTAYYRGLCA
HHHHCCHHHEEEECCCCCCEEEECCCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHHHHH
GMMELIEQLKKTKVNGVDLWSETVIQVISEFNRTARTNGTGSDHGFNQMVTSVFSGAIQR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
GPFVVGNIYRAGHGGGYVGTQGRAAPIDGYNQKGMPSPTMAASTVTALLRVPKNPYENLA
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
EPLIRLNGDQLQILKAAKLVG
HHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA