| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is mltE [H]
Identifier: 42522672
GI number: 42522672
Start: 1059185
End: 1061413
Strand: Direct
Name: mltE [H]
Synonym: Bd1124
Alternate gene names: 42522672
Gene position: 1059185-1061413 (Clockwise)
Preceding gene: 42522671
Following gene: 42522673
Centisome position: 28.0
GC content: 51.82
Gene sequence:
>2229_bases GTGAAAAAAAGGATCATGGCCAGCGGCCTTCTGTTGGGAAGTGTCGCTTTCGCCCAAGTGCAAAAAGTGGACGTGAAAAA AGAGCTGCCGAAAGCTGCGGTGGTGGATCTTTATAAAATTTCAGATGCGAAAAAAACGACCAAACTTTCACCGCTGTCGC AGTTGAAAGACTATGAAATTCATCTGAAATGGGCCGAGTGTGCACGACTGGCGCCACAAGTGTTCACCGCTAACAAAGAC CTTCGTGGCTGGATTGGTGTGAGCTGGCTGCACTGTCTGGATGAAGCCCAGAAGAAAGCCAAAGACCGTGCAGCGGTGGA TCGTGCGCTGACCACGATGGAAGCCCACAAAGATCTTTTCCGCAACGGTCCGTGGTCGGTAAGTCTTGAAAAGTACTATC TGGATTTCAAGATGGTGCAGTTGGAAGATCAAGTGACCCGTAAAAACAAAAAGGCCGCCGCCAGCATTGATGCTTTGTTA TCCAGTGCTGCATCCCTGAGTCGTGAACAGAAATCCAAGGCTTATCAGCTGCTGGGCGATCTGGCGATGCTTGATAACAA CTACAACGAAGCGCAGTTCTTTTTTGAGCAGGCCCAGGACCAGAAAGACTCCAAATACCTTCAGGAAAAGCTGGATTTCA TCGCCAAGACCAAAACAACAGTGACGCCACCGGCAAAAGCGGCCACCACGTCATCTGAGGTGGCAGGAGATGAAGCCAAG ATTGAAGAACGCATCCGTCTGGCGCAAAAGCAGAACGATCCTGTCGCCGCACTCAAAGACAGTGTGCAGATTCTGAATGA ATACCCGGGCAGCCGCGCTGCGCGCCGTCTGAAAGACAGGCCGCTGGAAATTTACAATTCCCTGAGTGAAAAGCTGGCCA AAGTCAAAGCTCTGAATGAAATGGAAGAAGCTGACACCGCGCGATTGATGGAGTGGGCACACAGCATGCATCGCCGTGCG GATTACTCCGGCTCGTTGTCTTTGGCCACCAAGGCTTTGGACAAAAACCCGCATGCCCCATCCACGACGTCGGCTTTGTG GATCGCCAGCCGCTCGGCGCATTTCATGGGTCAGTACGACAAAGCGCTGGAGCTTTATAAAAAGCTGTACACTTATCATC TGGGTTCGGATGAAGCGGCAGAAGCTTTGTTCCGGGCCAGTCTGATTTATTTCCGCAAGCAGGACTACACAAGTTCTTCG GCCTTGCTGGAGCGCCTGTTGCAGCAGGGGCGTGATCGCTATGATCTGAACGGACAGTACTGGCTTGTGCGCTCTTTACA GGAAAGCAAATCCGAGCGTGCGGCGCAGGCTGCAGCTGATTTGATCGAACGTTATCCGTTTTCTTACTATGGCCTTCGTC TGCGGGCCGAGTCACAAAAAGGCAAATTGTCCTGGCCCGAGAATAAAGACAAGGCTCCTGCTTTGGGATCTGAGTTCTTT GTCGTGGGGGCGCAAAAAGGTGCATGGCGCAGATTCAAAGTCCTGTCCGAAGCGGGTTGGGTCAGTGAAGCTCAGGAAGA GCTTTCCTCTGTGCCGTTCCTGAAGGATGCGACTTTGAAAGTTCAATTGGCGGAAAAACTAGTGGAACGACATCAGTATG TTACTGCCATTCGTTGGATCAATGAAGCCATGGAGGCGGATCCGCGTCTGCGCCGCGAGCAGTTTGTGAAGATCGGATAC CCGGAAGCCTTTGCCAGTCTGTATCAGGCTGAGGCGGAACGTTATGGCATCGACGCGGTTTTGTTTAAAAGCCTGACTCG TCAGGAAAGTGCCTTCAATCTGAAGGCAGTTTCAACCTCGAATGCTCTGGGTCTGATGCAGATGATTCCACCAACGGCCC AGGAAGTGTCCAAGAAACTGGGCATGAAGGTGGAGCTTCCGGATGACATGTTCCGTCCTGAAGTGAACATTCCGATGGGC TCTTACTATGTCTCCCAGATGTTAGACCAGTTCCAGGGAAGCGTTCCTTTCGCTCTGGCGGCTTATAACGCAGGACCCTA TCGCGTGAAGCTGTGGATCGACGCAAGAGCTGAGGTCAGCGAATTACTTGCCAAGCCCAGCTCCGCCCCTGTGGATGAGC TGTGGTTTGATGAGCTGCCATGGACGGAAACAAGCTTCTATGTGAAGGCCATTCTTCGCAACGTCCTGCTGTATCGGCTG TCAGAGAAGGGCAATTACGAGGTAAATCCCGTCTTATGGCAGGATTTGCTTAACAAAAAGGCAAAATAA
Upstream 100 bases:
>100_bases CGCGAGAACCAAGTCTGATATATCTGCGCAAAGCTGATTTTGACATGAGTGATTACAAGGGGCGCCTGCAAAGCGTGGGG CCAGAGTTGGAGGAGTCTCC
Downstream 100 bases:
>100_bases GGGCGATGTTTTATTGAAAAATCCCTCTGAGTTTTGTAGCCTGAAAACTCAGTCGGAGGACTCATGAGGAGACTTTTAAC ATTGAGTTTGGTCCTGGCCT
Product: putative soluble lytic transglycosylase
Products: 1,6-Anhydrobond [C]
Alternate protein names: NA
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MKKRIMASGLLLGSVAFAQVQKVDVKKELPKAAVVDLYKISDAKKTTKLSPLSQLKDYEIHLKWAECARLAPQVFTANKD LRGWIGVSWLHCLDEAQKKAKDRAAVDRALTTMEAHKDLFRNGPWSVSLEKYYLDFKMVQLEDQVTRKNKKAAASIDALL SSAASLSREQKSKAYQLLGDLAMLDNNYNEAQFFFEQAQDQKDSKYLQEKLDFIAKTKTTVTPPAKAATTSSEVAGDEAK IEERIRLAQKQNDPVAALKDSVQILNEYPGSRAARRLKDRPLEIYNSLSEKLAKVKALNEMEEADTARLMEWAHSMHRRA DYSGSLSLATKALDKNPHAPSTTSALWIASRSAHFMGQYDKALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSS ALLERLLQQGRDRYDLNGQYWLVRSLQESKSERAAQAAADLIERYPFSYYGLRLRAESQKGKLSWPENKDKAPALGSEFF VVGAQKGAWRRFKVLSEAGWVSEAQEELSSVPFLKDATLKVQLAEKLVERHQYVTAIRWINEAMEADPRLRREQFVKIGY PEAFASLYQAEAERYGIDAVLFKSLTRQESAFNLKAVSTSNALGLMQMIPPTAQEVSKKLGMKVELPDDMFRPEVNIPMG SYYVSQMLDQFQGSVPFALAAYNAGPYRVKLWIDARAEVSELLAKPSSAPVDELWFDELPWTETSFYVKAILRNVLLYRL SEKGNYEVNPVLWQDLLNKKAK
Sequences:
>Translated_742_residues MKKRIMASGLLLGSVAFAQVQKVDVKKELPKAAVVDLYKISDAKKTTKLSPLSQLKDYEIHLKWAECARLAPQVFTANKD LRGWIGVSWLHCLDEAQKKAKDRAAVDRALTTMEAHKDLFRNGPWSVSLEKYYLDFKMVQLEDQVTRKNKKAAASIDALL SSAASLSREQKSKAYQLLGDLAMLDNNYNEAQFFFEQAQDQKDSKYLQEKLDFIAKTKTTVTPPAKAATTSSEVAGDEAK IEERIRLAQKQNDPVAALKDSVQILNEYPGSRAARRLKDRPLEIYNSLSEKLAKVKALNEMEEADTARLMEWAHSMHRRA DYSGSLSLATKALDKNPHAPSTTSALWIASRSAHFMGQYDKALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSS ALLERLLQQGRDRYDLNGQYWLVRSLQESKSERAAQAAADLIERYPFSYYGLRLRAESQKGKLSWPENKDKAPALGSEFF VVGAQKGAWRRFKVLSEAGWVSEAQEELSSVPFLKDATLKVQLAEKLVERHQYVTAIRWINEAMEADPRLRREQFVKIGY PEAFASLYQAEAERYGIDAVLFKSLTRQESAFNLKAVSTSNALGLMQMIPPTAQEVSKKLGMKVELPDDMFRPEVNIPMG SYYVSQMLDQFQGSVPFALAAYNAGPYRVKLWIDARAEVSELLAKPSSAPVDELWFDELPWTETSFYVKAILRNVLLYRL SEKGNYEVNPVLWQDLLNKKAK >Mature_742_residues MKKRIMASGLLLGSVAFAQVQKVDVKKELPKAAVVDLYKISDAKKTTKLSPLSQLKDYEIHLKWAECARLAPQVFTANKD LRGWIGVSWLHCLDEAQKKAKDRAAVDRALTTMEAHKDLFRNGPWSVSLEKYYLDFKMVQLEDQVTRKNKKAAASIDALL SSAASLSREQKSKAYQLLGDLAMLDNNYNEAQFFFEQAQDQKDSKYLQEKLDFIAKTKTTVTPPAKAATTSSEVAGDEAK IEERIRLAQKQNDPVAALKDSVQILNEYPGSRAARRLKDRPLEIYNSLSEKLAKVKALNEMEEADTARLMEWAHSMHRRA DYSGSLSLATKALDKNPHAPSTTSALWIASRSAHFMGQYDKALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSS ALLERLLQQGRDRYDLNGQYWLVRSLQESKSERAAQAAADLIERYPFSYYGLRLRAESQKGKLSWPENKDKAPALGSEFF VVGAQKGAWRRFKVLSEAGWVSEAQEELSSVPFLKDATLKVQLAEKLVERHQYVTAIRWINEAMEADPRLRREQFVKIGY PEAFASLYQAEAERYGIDAVLFKSLTRQESAFNLKAVSTSNALGLMQMIPPTAQEVSKKLGMKVELPDDMFRPEVNIPMG SYYVSQMLDQFQGSVPFALAAYNAGPYRVKLWIDARAEVSELLAKPSSAPVDELWFDELPWTETSFYVKAILRNVLLYRL SEKGNYEVNPVLWQDLLNKKAK
Specific function: Murein-Degrading Enzyme. Catalyzes The Cleavage Of The Glycosidic Bonds Between N-Acetylmuramic Acid And N- Acetylglucosamine Residues In Peptidoglycan. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division. [C]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Periplasmic Protein. Tightly Associated With The Murein Sacculus [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082441, Length=162, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 84150; Mature: 84150
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIMASGLLLGSVAFAQVQKVDVKKELPKAAVVDLYKISDAKKTTKLSPLSQLKDYEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCHHHHCCCCEE HLKWAECARLAPQVFTANKDLRGWIGVSWLHCLDEAQKKAKDRAAVDRALTTMEAHKDLF EEEHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNGPWSVSLEKYYLDFKMVQLEDQVTRKNKKAAASIDALLSSAASLSREQKSKAYQLLGD HCCCCEEEEEHHEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAMLDNNYNEAQFFFEQAQDQKDSKYLQEKLDFIAKTKTTVTPPAKAATTSSEVAGDEAK HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHH IEERIRLAQKQNDPVAALKDSVQILNEYPGSRAARRLKDRPLEIYNSLSEKLAKVKALNE HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH MEEADTARLMEWAHSMHRRADYSGSLSLATKALDKNPHAPSTTSALWIASRSAHFMGQYD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHH KALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSSALLERLLQQGRDRYDLNGQY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCE WLVRSLQESKSERAAQAAADLIERYPFSYYGLRLRAESQKGKLSWPENKDKAPALGSEFF EEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE VVGAQKGAWRRFKVLSEAGWVSEAQEELSSVPFLKDATLKVQLAEKLVERHQYVTAIRWI EEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NEAMEADPRLRREQFVKIGYPEAFASLYQAEAERYGIDAVLFKSLTRQESAFNLKAVSTS HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCC NALGLMQMIPPTAQEVSKKLGMKVELPDDMFRPEVNIPMGSYYVSQMLDQFQGSVPFALA CCHHHHHHCCCCHHHHHHHCCCEEECCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE AYNAGPYRVKLWIDARAEVSELLAKPSSAPVDELWFDELPWTETSFYVKAILRNVLLYRL EECCCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SEKGNYEVNPVLWQDLLNKKAK CCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKKRIMASGLLLGSVAFAQVQKVDVKKELPKAAVVDLYKISDAKKTTKLSPLSQLKDYEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCHHHHCCCCEE HLKWAECARLAPQVFTANKDLRGWIGVSWLHCLDEAQKKAKDRAAVDRALTTMEAHKDLF EEEHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNGPWSVSLEKYYLDFKMVQLEDQVTRKNKKAAASIDALLSSAASLSREQKSKAYQLLGD HCCCCEEEEEHHEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAMLDNNYNEAQFFFEQAQDQKDSKYLQEKLDFIAKTKTTVTPPAKAATTSSEVAGDEAK HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHH IEERIRLAQKQNDPVAALKDSVQILNEYPGSRAARRLKDRPLEIYNSLSEKLAKVKALNE HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH MEEADTARLMEWAHSMHRRADYSGSLSLATKALDKNPHAPSTTSALWIASRSAHFMGQYD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHH KALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSSALLERLLQQGRDRYDLNGQY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCE WLVRSLQESKSERAAQAAADLIERYPFSYYGLRLRAESQKGKLSWPENKDKAPALGSEFF EEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE VVGAQKGAWRRFKVLSEAGWVSEAQEELSSVPFLKDATLKVQLAEKLVERHQYVTAIRWI EEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NEAMEADPRLRREQFVKIGYPEAFASLYQAEAERYGIDAVLFKSLTRQESAFNLKAVSTS HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCC NALGLMQMIPPTAQEVSKKLGMKVELPDDMFRPEVNIPMGSYYVSQMLDQFQGSVPFALA CCHHHHHHCCCCHHHHHHHCCCEEECCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE AYNAGPYRVKLWIDARAEVSELLAKPSSAPVDELWFDELPWTETSFYVKAILRNVLLYRL EECCCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SEKGNYEVNPVLWQDLLNKKAK CCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]