Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522671

Identifier: 42522671

GI number: 42522671

Start: 1057668

End: 1059188

Strand: Direct

Name: 42522671

Synonym: Bd1123

Alternate gene names: NA

Gene position: 1057668-1059188 (Clockwise)

Preceding gene: 42522669

Following gene: 42522672

Centisome position: 27.96

GC content: 51.41

Gene sequence:

>1521_bases
ATGAAATCTCTCAAGGTCACGAACTTCTCTCATGCGGCTTTCTGGGCGGGGCTTTTCCTGCTGGCATTGATCAGTCGTTT
TGCTCTTTTGACCAACAAACCCATTCATTTTGACGAAAGCATCAACGGCTGGTTCGTGATGCAGATGTCTAAGCTGGGTT
ATTACAAGTACGATCCCAACAACTATCACGGTCCGATGTACTTTTATATGCTGCAGGGGTTTGAGTCCCTGTGGGGCCGA
AGTCTGGAAACTCTGCGAGCAGTGCCCGCGGTATTCAGCGTGCTCAGTGTGGTTGTTCTGGCCTGGGGGGCGCTTCGTCC
CAAGGCTGTGAACATGGTGATGGCAGTACTGGTGCTGCTCAGTCCGGCCTTTGTCTTTTTTGGCCGTTCGGGAATTCATG
AAATGCCTTTTGTGTTTTTCCAACTGGTGGCGGGTATGGGAATCTTGCGCTGGATCGGACGTCAGGATGAAAAAGCGCTG
GGGCTTTTCCTGATCGGGCTGTGGGGCATGATGGCGCTGAAGGAAACATTCGTGATCACGATGTTTGCCTGGGTGGTGGC
CTTTTTGACTCTGGGGTGGAATCAATTGCGCACGATGTTTTCCCCGGAAACAATTCGCTTGGCGTGGAGTGGTCGTCTGA
CTGTTTTGACGGTGTTGCTGCTTTTGATCTTCCTGCAGTTGTTCACGGGCTTTTATCAGAATCTTTCAGGCATCATCGAT
TTCTTTAAAGCGGTACTGCCATGGTTGAAAACCGGGGTGCATGGTCATGGTCACGAAAAAAGCGTGTGGTACTGGCTGCA
GGTCCTTTACACGGCTGAGCCATTGGTGCTTTTGGGCGGCTTGCTGGCGGTCGTGGGTATCTTCTCCAAACGCAGGGAAC
TGCGTGCTGTCAGTGTGTTTTCATTGGTGCAGCTTTTGGTGTATTCCCTGATCCCGTACAAGACGGTGTGGTGTGTGCTT
TCGCTGGTGTGGGGTTTTTACTTTGTTCTGGCGATGTCGCTGGTCAATGCCTTTGAATCCCGCTTTGTGGGCCGCCATGT
GCTGGCGGGTGTGGCAGTGTTGTTGGCGGCCGTGGGCCTTCGTAGTGCGTGGATCTCAGTGTATCAAAGACCTATTGATT
TGACGCATCCTTATGTTTACGTCAATTCCACCTACGAGCTGGTGCAGGTTTCTGACCTTATCACCAAAAATATTCTGGAA
AAACCTTCGTTGGCCCAACAAAGAATGCAAGTCGGCATGAAAGAACAGTGGCCATGGCCGTGGCTTTTGCGCTATGCAAA
TAATTTGTCCTATGAGCTTTGCAGCAAACGCGTTCAGGAAAATGCCGCTGTGTATTTCTGTGACTACGGGGTCGCCGATC
CTCTGGAGTTGTTGTTGAACGAGCCGTATTGGAAGCTGGAAGTGGTCTTCCGCCAGTCGCGAGAACCAAGTCTGATATAT
CTGCGCAAAGCTGATTTTGACATGAGTGATTACAAGGGGCGCCTGCAAAGCGTGGGGCCAGAGTTGGAGGAGTCTCCGTG
A

Upstream 100 bases:

>100_bases
TCGCGCAGGTACGCCGGAAGCATTTCAGGCTGTTCCAAATAAACAATCAGTGAGCAGTGCGGGGTTGACACGGAAGATTC
CATCTTTACGATAGTTAACA

Downstream 100 bases:

>100_bases
AAAAAAGGATCATGGCCAGCGGCCTTCTGTTGGGAAGTGTCGCTTTCGCCCAAGTGCAAAAAGTGGACGTGAAAAAAGAG
CTGCCGAAAGCTGCGGTGGT

Product: putative membrane-bound mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MKSLKVTNFSHAAFWAGLFLLALISRFALLTNKPIHFDESINGWFVMQMSKLGYYKYDPNNYHGPMYFYMLQGFESLWGR
SLETLRAVPAVFSVLSVVVLAWGALRPKAVNMVMAVLVLLSPAFVFFGRSGIHEMPFVFFQLVAGMGILRWIGRQDEKAL
GLFLIGLWGMMALKETFVITMFAWVVAFLTLGWNQLRTMFSPETIRLAWSGRLTVLTVLLLLIFLQLFTGFYQNLSGIID
FFKAVLPWLKTGVHGHGHEKSVWYWLQVLYTAEPLVLLGGLLAVVGIFSKRRELRAVSVFSLVQLLVYSLIPYKTVWCVL
SLVWGFYFVLAMSLVNAFESRFVGRHVLAGVAVLLAAVGLRSAWISVYQRPIDLTHPYVYVNSTYELVQVSDLITKNILE
KPSLAQQRMQVGMKEQWPWPWLLRYANNLSYELCSKRVQENAAVYFCDYGVADPLELLLNEPYWKLEVVFRQSREPSLIY
LRKADFDMSDYKGRLQSVGPELEESP

Sequences:

>Translated_506_residues
MKSLKVTNFSHAAFWAGLFLLALISRFALLTNKPIHFDESINGWFVMQMSKLGYYKYDPNNYHGPMYFYMLQGFESLWGR
SLETLRAVPAVFSVLSVVVLAWGALRPKAVNMVMAVLVLLSPAFVFFGRSGIHEMPFVFFQLVAGMGILRWIGRQDEKAL
GLFLIGLWGMMALKETFVITMFAWVVAFLTLGWNQLRTMFSPETIRLAWSGRLTVLTVLLLLIFLQLFTGFYQNLSGIID
FFKAVLPWLKTGVHGHGHEKSVWYWLQVLYTAEPLVLLGGLLAVVGIFSKRRELRAVSVFSLVQLLVYSLIPYKTVWCVL
SLVWGFYFVLAMSLVNAFESRFVGRHVLAGVAVLLAAVGLRSAWISVYQRPIDLTHPYVYVNSTYELVQVSDLITKNILE
KPSLAQQRMQVGMKEQWPWPWLLRYANNLSYELCSKRVQENAAVYFCDYGVADPLELLLNEPYWKLEVVFRQSREPSLIY
LRKADFDMSDYKGRLQSVGPELEESP
>Mature_506_residues
MKSLKVTNFSHAAFWAGLFLLALISRFALLTNKPIHFDESINGWFVMQMSKLGYYKYDPNNYHGPMYFYMLQGFESLWGR
SLETLRAVPAVFSVLSVVVLAWGALRPKAVNMVMAVLVLLSPAFVFFGRSGIHEMPFVFFQLVAGMGILRWIGRQDEKAL
GLFLIGLWGMMALKETFVITMFAWVVAFLTLGWNQLRTMFSPETIRLAWSGRLTVLTVLLLLIFLQLFTGFYQNLSGIID
FFKAVLPWLKTGVHGHGHEKSVWYWLQVLYTAEPLVLLGGLLAVVGIFSKRRELRAVSVFSLVQLLVYSLIPYKTVWCVL
SLVWGFYFVLAMSLVNAFESRFVGRHVLAGVAVLLAAVGLRSAWISVYQRPIDLTHPYVYVNSTYELVQVSDLITKNILE
KPSLAQQRMQVGMKEQWPWPWLLRYANNLSYELCSKRVQENAAVYFCDYGVADPLELLLNEPYWKLEVVFRQSREPSLIY
LRKADFDMSDYKGRLQSVGPELEESP

Specific function: Unknown

COG id: COG4745

COG function: function code O; Predicted membrane-bound mannosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57973; Mature: 57973

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSLKVTNFSHAAFWAGLFLLALISRFALLTNKPIHFDESINGWFVMQMSKLGYYKYDPN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCEEECCC
NYHGPMYFYMLQGFESLWGRSLETLRAVPAVFSVLSVVVLAWGALRPKAVNMVMAVLVLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SPAFVFFGRSGIHEMPFVFFQLVAGMGILRWIGRQDEKALGLFLIGLWGMMALKETFVIT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MFAWVVAFLTLGWNQLRTMFSPETIRLAWSGRLTVLTVLLLLIFLQLFTGFYQNLSGIID
HHHHHHHHHHHCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFKAVLPWLKTGVHGHGHEKSVWYWLQVLYTAEPLVLLGGLLAVVGIFSKRRELRAVSVF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVQLLVYSLIPYKTVWCVLSLVWGFYFVLAMSLVNAFESRFVGRHVLAGVAVLLAAVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSAWISVYQRPIDLTHPYVYVNSTYELVQVSDLITKNILEKPSLAQQRMQVGMKEQWPWP
HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH
WLLRYANNLSYELCSKRVQENAAVYFCDYGVADPLELLLNEPYWKLEVVFRQSREPSLIY
HHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEE
LRKADFDMSDYKGRLQSVGPELEESP
EEECCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA