Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522655

Identifier: 42522655

GI number: 42522655

Start: 1041766

End: 1042383

Strand: Direct

Name: 42522655

Synonym: Bd1106

Alternate gene names: NA

Gene position: 1041766-1042383 (Clockwise)

Preceding gene: 42522654

Following gene: 42522657

Centisome position: 27.54

GC content: 49.51

Gene sequence:

>618_bases
ATGATCATCAGACTTGCTCTGTCCATGTTGTTGTTGGGTTGTCTTTCGCTGGGATCGGCTACGGCTTGGGCTTTGGATTT
TGACAAAGATACCGGGATGTCGCGAGAGGTTCTGGTGGAGTCTTTGAAAAAGAACACCCGCTTGAATCAAGAGCAGATCG
ATCAGCTGGTTGTTACTTTGCAAAATCAGTTCAATGTGCAACCGGGGGATAAAATTCCTATCAAGGGTTATTTGTATGCC
CACGGTATGAATGTCGGTCTGTTTGTGGATCACGATGTGTGGGCTTTTGATGCGGCTTTCCTGGTGCCGGGCACAGATGA
AGTGGTGCGTGTTCCAGGTTTGTATCTTTGTGATTTCAAAAATGGCGGCTTGAAGTTTGAGGTCGCCTACAAGTGGATGT
TCAGCTTCATCCCAAGTGGAGTGTCATTGAGCGAACTTAACGGCGCGGTCTATGGTCGTGGAGTCGGGGTGGTGGCCGAA
GCTTTTCTGGGCCTTGAGGGCTCTTGGTTGCCTGCGCAAAATCGGGTGAATGATCTGTTTCACGTCGCGGTGAAACTGGG
CTTTGGCGGTGGGATGGTGTTCCCGAAAATGGAATTCAAGCTGCGTAATATCCAATAG

Upstream 100 bases:

>100_bases
GGACGGCTTGCATGTTGAGGGTGGGGTGGCTGAACTCCAAATTTTTTGTTACTGATTTTTTCAAATAAGCGGTAGCCTTT
TTCCAACAGGAGAAATCATC

Downstream 100 bases:

>100_bases
GCGCTTCTGTTCTGAAAATCTGGTCTTGAAACAAAAAACCCGCTCTTTCGAAGCGGGTTTTTTGTTTTTAAATCACATCT
GAAAAATCAGATCGAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIIRLALSMLLLGCLSLGSATAWALDFDKDTGMSREVLVESLKKNTRLNQEQIDQLVVTLQNQFNVQPGDKIPIKGYLYA
HGMNVGLFVDHDVWAFDAAFLVPGTDEVVRVPGLYLCDFKNGGLKFEVAYKWMFSFIPSGVSLSELNGAVYGRGVGVVAE
AFLGLEGSWLPAQNRVNDLFHVAVKLGFGGGMVFPKMEFKLRNIQ

Sequences:

>Translated_205_residues
MIIRLALSMLLLGCLSLGSATAWALDFDKDTGMSREVLVESLKKNTRLNQEQIDQLVVTLQNQFNVQPGDKIPIKGYLYA
HGMNVGLFVDHDVWAFDAAFLVPGTDEVVRVPGLYLCDFKNGGLKFEVAYKWMFSFIPSGVSLSELNGAVYGRGVGVVAE
AFLGLEGSWLPAQNRVNDLFHVAVKLGFGGGMVFPKMEFKLRNIQ
>Mature_205_residues
MIIRLALSMLLLGCLSLGSATAWALDFDKDTGMSREVLVESLKKNTRLNQEQIDQLVVTLQNQFNVQPGDKIPIKGYLYA
HGMNVGLFVDHDVWAFDAAFLVPGTDEVVRVPGLYLCDFKNGGLKFEVAYKWMFSFIPSGVSLSELNGAVYGRGVGVVAE
AFLGLEGSWLPAQNRVNDLFHVAVKLGFGGGMVFPKMEFKLRNIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22608; Mature: 22608

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRLALSMLLLGCLSLGSATAWALDFDKDTGMSREVLVESLKKNTRLNQEQIDQLVVTL
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
QNQFNVQPGDKIPIKGYLYAHGMNVGLFVDHDVWAFDAAFLVPGTDEVVRVPGLYLCDFK
HHHCCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCEEECCCEEEEEEC
NGGLKFEVAYKWMFSFIPSGVSLSELNGAVYGRGVGVVAEAFLGLEGSWLPAQNRVNDLF
CCCEEEEHHHHHHHHHCCCCCCHHHCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHH
HVAVKLGFGGGMVFPKMEFKLRNIQ
HHHEEECCCCCEECCEEEEEEECCC
>Mature Secondary Structure
MIIRLALSMLLLGCLSLGSATAWALDFDKDTGMSREVLVESLKKNTRLNQEQIDQLVVTL
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
QNQFNVQPGDKIPIKGYLYAHGMNVGLFVDHDVWAFDAAFLVPGTDEVVRVPGLYLCDFK
HHHCCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCEEECCCEEEEEEC
NGGLKFEVAYKWMFSFIPSGVSLSELNGAVYGRGVGVVAEAFLGLEGSWLPAQNRVNDLF
CCCEEEEHHHHHHHHHCCCCCCHHHCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHH
HVAVKLGFGGGMVFPKMEFKLRNIQ
HHHEEECCCCCEECCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA