| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522657
Identifier: 42522657
GI number: 42522657
Start: 1043857
End: 1044270
Strand: Direct
Name: 42522657
Synonym: Bd1108
Alternate gene names: NA
Gene position: 1043857-1044270 (Clockwise)
Preceding gene: 42522655
Following gene: 42522658
Centisome position: 27.59
GC content: 54.83
Gene sequence:
>414_bases GTGGCTGTTACAGCTGCCGTCATCTATCAGTTCGCCGGATCCGGTGGCGCCGCATTGAATGGTGTCGAGGTCGACTGGCG ATTGTTGGGTGAGATGGACTATGTGACTGGCAACTCGTCTTCAGAGCTGAAAGCGCTGGACGGGAAGACTGTCAAGATTC CGGGCTTCATGGTGCCCCTTGAAGACGATCAGCGCGAAGTGGTGGAGTTCCTTTTGGTGCCAAGCCCGCAGGCTTGCATC CACGTTCCACCGCCGCCGCCGAATCAAATGGTGTACGTTAAGATGAAACGCGGAACTGATGCGGCGGTAGGGCCGATCTG GGTCCACGGAACTTTGAATCTAGTGACTAAGAAGTCTATGTACGGGGATGCCTCGTTCGAATTGATCGGAGAGGCGATCG AACCTTACAAATAA
Upstream 100 bases:
>100_bases ATCAGAGGCACGGGCGGTGCGCAAAGCTATTGCTTTTAAAGAGGGGAGCGTCTTTAATGGAATTATGAAGAAGTGGGTAT TAGCAGGAGCGTTCATTCTG
Downstream 100 bases:
>100_bases CTTTCAAGGAGGTCTTTATGTTGAAAGTTCTTCTGTTTTCCCTGATGGCCATGGCGCATTCCGATCACAGCGCGCACAAT CAAAGTGCCCACGTTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Secreted Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPLEDDQREVVEFLLVPSPQACI HVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSMYGDASFELIGEAIEPYK
Sequences:
>Translated_137_residues MAVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPLEDDQREVVEFLLVPSPQACI HVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSMYGDASFELIGEAIEPYK >Mature_136_residues AVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPLEDDQREVVEFLLVPSPQACIH VPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSMYGDASFELIGEAIEPYK
Specific function: Unknown
COG id: COG3495
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14779; Mature: 14648
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPL CCCHHEEEEEECCCCCCEECCCEEEEEEECEEEEEECCCCCCEEECCCCEEECCEEEEEC EDDQREVVEFLLVPSPQACIHVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSM CCCHHHHHHEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCC YGDASFELIGEAIEPYK CCCCHHHHHHHHCCCCC >Mature Secondary Structure AVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPL CCHHEEEEEECCCCCCEECCCEEEEEEECEEEEEECCCCCCEEECCCCEEECCEEEEEC EDDQREVVEFLLVPSPQACIHVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSM CCCHHHHHHEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCC YGDASFELIGEAIEPYK CCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA