Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522657

Identifier: 42522657

GI number: 42522657

Start: 1043857

End: 1044270

Strand: Direct

Name: 42522657

Synonym: Bd1108

Alternate gene names: NA

Gene position: 1043857-1044270 (Clockwise)

Preceding gene: 42522655

Following gene: 42522658

Centisome position: 27.59

GC content: 54.83

Gene sequence:

>414_bases
GTGGCTGTTACAGCTGCCGTCATCTATCAGTTCGCCGGATCCGGTGGCGCCGCATTGAATGGTGTCGAGGTCGACTGGCG
ATTGTTGGGTGAGATGGACTATGTGACTGGCAACTCGTCTTCAGAGCTGAAAGCGCTGGACGGGAAGACTGTCAAGATTC
CGGGCTTCATGGTGCCCCTTGAAGACGATCAGCGCGAAGTGGTGGAGTTCCTTTTGGTGCCAAGCCCGCAGGCTTGCATC
CACGTTCCACCGCCGCCGCCGAATCAAATGGTGTACGTTAAGATGAAACGCGGAACTGATGCGGCGGTAGGGCCGATCTG
GGTCCACGGAACTTTGAATCTAGTGACTAAGAAGTCTATGTACGGGGATGCCTCGTTCGAATTGATCGGAGAGGCGATCG
AACCTTACAAATAA

Upstream 100 bases:

>100_bases
ATCAGAGGCACGGGCGGTGCGCAAAGCTATTGCTTTTAAAGAGGGGAGCGTCTTTAATGGAATTATGAAGAAGTGGGTAT
TAGCAGGAGCGTTCATTCTG

Downstream 100 bases:

>100_bases
CTTTCAAGGAGGTCTTTATGTTGAAAGTTCTTCTGTTTTCCCTGATGGCCATGGCGCATTCCGATCACAGCGCGCACAAT
CAAAGTGCCCACGTTCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Secreted Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPLEDDQREVVEFLLVPSPQACI
HVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSMYGDASFELIGEAIEPYK

Sequences:

>Translated_137_residues
MAVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPLEDDQREVVEFLLVPSPQACI
HVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSMYGDASFELIGEAIEPYK
>Mature_136_residues
AVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPLEDDQREVVEFLLVPSPQACIH
VPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSMYGDASFELIGEAIEPYK

Specific function: Unknown

COG id: COG3495

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14779; Mature: 14648

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPL
CCCHHEEEEEECCCCCCEECCCEEEEEEECEEEEEECCCCCCEEECCCCEEECCEEEEEC
EDDQREVVEFLLVPSPQACIHVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSM
CCCHHHHHHEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCC
YGDASFELIGEAIEPYK
CCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AVTAAVIYQFAGSGGAALNGVEVDWRLLGEMDYVTGNSSSELKALDGKTVKIPGFMVPL
CCHHEEEEEECCCCCCEECCCEEEEEEECEEEEEECCCCCCEEECCCCEEECCEEEEEC
EDDQREVVEFLLVPSPQACIHVPPPPPNQMVYVKMKRGTDAAVGPIWVHGTLNLVTKKSM
CCCHHHHHHEEECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCC
YGDASFELIGEAIEPYK
CCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA