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The map label for this gene is sun [H]

Identifier: 42522650

GI number: 42522650

Start: 1036785

End: 1037972

Strand: Direct

Name: sun [H]

Synonym: Bd1101

Alternate gene names: 42522650

Gene position: 1036785-1037972 (Clockwise)

Preceding gene: 42522649

Following gene: 42522651

Centisome position: 27.41

GC content: 52.19

Gene sequence:

>1188_bases
TTGAAAATTCACAAGCATCTCGTATCTGAAATCGTTACCGCTCTGGATGAAATCTTTGAACAGGGTTTCTATGCTGACAA
AGTCATCCAGCGCCATCTGAAGGCCAACTCCCGCTGGGGTTCCCGCGACCGCCGTTTCTTTGCTGAATCTGTTTACGAAA
TCGTGCGCTGGGAGCGCCTGCTGTCCCACCTTGCGGATGACAATGATCTTTGGAAAGTCTGGGGCGCCTACTGGGTGCGC
GGCGGGAACGAACTTCCGGACTGGGAAGAGCTTGACGGTCTTGACCCGAAAGAAGTCATCGCCCGTGAAAAGAATGTTTC
ATCGTTCGCCATTGCGCAAAGTATTCCGGACTGGATGCACGAACGTGGCACCCTGGAATTGGGCGAAGAGTGGAAGGATG
CGATGCGCGCGTTGAACAAACCCGCGGAAGTGTTCCTGCGCACCAACACTTTGAAAACCACGCCGGATGAGCTGATCAAA
ACTTTGGAAAAAGACGGCATCAACGCCACGAAAGTTTCTCCGGATCTGCCGAACGCTCTGCGCTTGGTGGAGCGTAAAAA
CGTCTTCATCACCGAATCTTTCAAGCAGGGTCTGTTCGAAGTGCAGGATGCCGCTTCCCAGATGGTGGCGCCGTTGCTTG
GAATTGAGCCCGGTCATCGCGTGATCGACGCGTGTGCGGGGGCCGGTGGCAAGAGTTTGCACATGGCTTCCATGATGAAG
AACAAGGGCAAGATCATCTCCCTGGATATTCATGATTGGAAATTGAAAGAGCTGAAAGTCCGTGCCCGCCGGGATGGTGT
GGACGTGATCGAAACACGTTTGATTGATTCCAACAAAGTGATCAAGCGCTTGTACGACACTGCGGACCGCGTGTTGCTGG
ACGTGCCTTGTTCGGGAATGGGCGTTTTGCGCCGCAATCCTGACACCAAATGGAAACTGAGCAACGAAGAGATCGACCGT
CTGCATGGTTTGCAGTACGAGATCTTGAGCACCTATTGCAACATGACCAAAAAAGGCGGGCAGATGGTCTATGCGACCTG
CAGCCTTTTGCCGAGTGAAAACGAAAAGCAGATTGAAAAATTCATGGCTGAACACGGGAAGGACTGGACTTTGCTCAAGC
AAATTCACGTTCGTCCGGATAAAGAGGGCTATGATGGCTTCTATGCAGCTTTGCTGAAGCGAAATTAA

Upstream 100 bases:

>100_bases
CTGGATTCTTCATTGAAGCTGGTTTAAAAAACCACCTTCTTATTCTGTCCTCGGGGCAGTTCAACGGAACCTTTTTGGCC
ACTGGCCTGGTGTTTACATT

Downstream 100 bases:

>100_bases
GAGTCTGCAACTGGACCCCGACTGGCCTCGGGGTCCTAAGCAAACGAGCCGATAAAGATCCTGTGAAGAGACTTTTGGTG
GCCGCCTTATTGATGTTTTC

Product: putative sun protein

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKIHKHLVSEIVTALDEIFEQGFYADKVIQRHLKANSRWGSRDRRFFAESVYEIVRWERLLSHLADDNDLWKVWGAYWVR
GGNELPDWEELDGLDPKEVIAREKNVSSFAIAQSIPDWMHERGTLELGEEWKDAMRALNKPAEVFLRTNTLKTTPDELIK
TLEKDGINATKVSPDLPNALRLVERKNVFITESFKQGLFEVQDAASQMVAPLLGIEPGHRVIDACAGAGGKSLHMASMMK
NKGKIISLDIHDWKLKELKVRARRDGVDVIETRLIDSNKVIKRLYDTADRVLLDVPCSGMGVLRRNPDTKWKLSNEEIDR
LHGLQYEILSTYCNMTKKGGQMVYATCSLLPSENEKQIEKFMAEHGKDWTLLKQIHVRPDKEGYDGFYAALLKRN

Sequences:

>Translated_395_residues
MKIHKHLVSEIVTALDEIFEQGFYADKVIQRHLKANSRWGSRDRRFFAESVYEIVRWERLLSHLADDNDLWKVWGAYWVR
GGNELPDWEELDGLDPKEVIAREKNVSSFAIAQSIPDWMHERGTLELGEEWKDAMRALNKPAEVFLRTNTLKTTPDELIK
TLEKDGINATKVSPDLPNALRLVERKNVFITESFKQGLFEVQDAASQMVAPLLGIEPGHRVIDACAGAGGKSLHMASMMK
NKGKIISLDIHDWKLKELKVRARRDGVDVIETRLIDSNKVIKRLYDTADRVLLDVPCSGMGVLRRNPDTKWKLSNEEIDR
LHGLQYEILSTYCNMTKKGGQMVYATCSLLPSENEKQIEKFMAEHGKDWTLLKQIHVRPDKEGYDGFYAALLKRN
>Mature_395_residues
MKIHKHLVSEIVTALDEIFEQGFYADKVIQRHLKANSRWGSRDRRFFAESVYEIVRWERLLSHLADDNDLWKVWGAYWVR
GGNELPDWEELDGLDPKEVIAREKNVSSFAIAQSIPDWMHERGTLELGEEWKDAMRALNKPAEVFLRTNTLKTTPDELIK
TLEKDGINATKVSPDLPNALRLVERKNVFITESFKQGLFEVQDAASQMVAPLLGIEPGHRVIDACAGAGGKSLHMASMMK
NKGKIISLDIHDWKLKELKVRARRDGVDVIETRLIDSNKVIKRLYDTADRVLLDVPCSGMGVLRRNPDTKWKLSNEEIDR
LHGLQYEILSTYCNMTKKGGQMVYATCSLLPSENEKQIEKFMAEHGKDWTLLKQIHVRPDKEGYDGFYAALLKRN

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI32698918, Length=195, Percent_Identity=30.7692307692308, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI76150625, Length=220, Percent_Identity=33.1818181818182, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI76150623, Length=220, Percent_Identity=33.1818181818182, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI301336155, Length=257, Percent_Identity=30.3501945525292, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI39995082, Length=277, Percent_Identity=28.5198555956679, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI8922322, Length=267, Percent_Identity=28.8389513108614, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI270288818, Length=267, Percent_Identity=28.8389513108614, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI23199998, Length=267, Percent_Identity=28.8389513108614, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI270288816, Length=267, Percent_Identity=28.8389513108614, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI2367212, Length=286, Percent_Identity=30.4195804195804, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI87081985, Length=289, Percent_Identity=26.643598615917, Blast_Score=97, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17536757, Length=233, Percent_Identity=30.0429184549356, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71998419, Length=260, Percent_Identity=28.0769230769231, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115534021, Length=167, Percent_Identity=30.5389221556886, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324268, Length=246, Percent_Identity=29.2682926829268, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6319447, Length=196, Percent_Identity=27.5510204081633, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI22024126, Length=220, Percent_Identity=32.7272727272727, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI21355201, Length=213, Percent_Identity=30.0469483568075, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI21356579, Length=218, Percent_Identity=25.2293577981651, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19920494, Length=183, Percent_Identity=32.2404371584699, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 45315; Mature: 45315

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHKHLVSEIVTALDEIFEQGFYADKVIQRHLKANSRWGSRDRRFFAESVYEIVRWERL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LSHLADDNDLWKVWGAYWVRGGNELPDWEELDGLDPKEVIAREKNVSSFAIAQSIPDWMH
HHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
ERGTLELGEEWKDAMRALNKPAEVFLRTNTLKTTPDELIKTLEKDGINATKVSPDLPNAL
CCCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHCCCCCEECCCCCHHHH
RLVERKNVFITESFKQGLFEVQDAASQMVAPLLGIEPGHRVIDACAGAGGKSLHMASMMK
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHH
NKGKIISLDIHDWKLKELKVRARRDGVDVIETRLIDSNKVIKRLYDTADRVLLDVPCSGM
CCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCC
GVLRRNPDTKWKLSNEEIDRLHGLQYEILSTYCNMTKKGGQMVYATCSLLPSENEKQIEK
CHHCCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH
FMAEHGKDWTLLKQIHVRPDKEGYDGFYAALLKRN
HHHHCCCCEEEHHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKIHKHLVSEIVTALDEIFEQGFYADKVIQRHLKANSRWGSRDRRFFAESVYEIVRWERL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LSHLADDNDLWKVWGAYWVRGGNELPDWEELDGLDPKEVIAREKNVSSFAIAQSIPDWMH
HHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
ERGTLELGEEWKDAMRALNKPAEVFLRTNTLKTTPDELIKTLEKDGINATKVSPDLPNAL
CCCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHCCCCCEECCCCCHHHH
RLVERKNVFITESFKQGLFEVQDAASQMVAPLLGIEPGHRVIDACAGAGGKSLHMASMMK
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHH
NKGKIISLDIHDWKLKELKVRARRDGVDVIETRLIDSNKVIKRLYDTADRVLLDVPCSGM
CCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCC
GVLRRNPDTKWKLSNEEIDRLHGLQYEILSTYCNMTKKGGQMVYATCSLLPSENEKQIEK
CHHCCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH
FMAEHGKDWTLLKQIHVRPDKEGYDGFYAALLKRN
HHHHCCCCEEEHHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]